Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1240 ATGGCTAAACCCCATCACCTCATTCTCCTCCTTCTGCTCTGTGCCACTCTACAATCTTCTCTCTCCATTGCAGCTTCACCCTCTGATCACCTCTACAACGTTGGAGATGTTGTCCCATTCTTTGTCAACAAAGTGGGACCCTTCAACAACCCAAGTGAGACATATGAGTACTATGATTTGCCATTCTGCACCCCAGACCCAATTGTGAAAAAGAAAGAGTCCCTTGGGGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCAGGGAGGACAAGAATGGTGCGACATTGGGCCAAAAGAAGCTTACAATTGATCAAGTTGCAATCTTTAAGCAAGCTATAAACCGTGAATTTTACTTCCAGTTTTACTTGGATGATCTTCCATTCTGGGGTTTCATTGGGAAACTTGAAGAGGATGGCTTGATTCCTGGTGGGGGAGGATCAAACTATTACCTTTTTACACATGTTCTATTTGATGTTCTGTATAATGGGAACCAAGTTGTGCAAGTGAATGCTATTGGTGATCCAAATCATGCTGTAGATATAACTAACGATGTTGGTGTTAATGTTGAGTTTACTTATTCTGTTATCTGGAATGCCACTAAACTACGTTTTGAGAACAGGATGGACAGATACTCGAGGGCTTCATTGCTGCCTGTGAGTAGTCAAGTTCACTGGTTCTCATTAGTTAACTCAATTGTCATCATTTTGCTTTTGATTGGTTTGCTTGCCCTCCTTTATATGAGGCATCTGAAGAGCGATTTGAAAAAGTATTCTAATGCAAGTGAAGAAGATAAGGAGGTTGGTTGGAAGTCCATCCATGGTGATGTACTCAGACCCCCTCCAAACTCATCATTACTTTTTGCTGTTGTGGGAACTGGTACCCAATTGCTAATCTTGCTTTGTGTCTTGCTGTTTCTTGCACTTATTGGCACCCTATATCCCTACAATCGTGGAGGACTGTTAAATTGGCTTGTCATCCTATATGCTCTTACCTCTGTTTTTTCTGGGTACACAGCAGCATCCTTCCATGGCCAGTTTGCCGAGATTGGATGGGAAAGGAGTGTTAGTCTGGCCGGGATTCTTTACACCGGACCAGTGTTTGTTGCAGCTTCTATCCTCAACATTATTGCAATATCATACAGGGCTACAGCTGGACTCCCAGTGGGTTCTATTGTTGTGATTCTTATATTATTCACATTTCTTTCCGTCCCATTGCTTGCATTTGGTGGAGTGCTTGGATTCCGTTTTAGATCTAAATTGCAGAGTCCCTCTTCTACAAAGAGATATCCAAGAGATATTCAGCAGCTTGCTTGGTATTGGAGAACACCATTTCAAATGTTTATTGGGGGTCTTGTTCCTTTTAGTGCAATTGTCCTGCAATTACATCAGGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGCCACATTCATCACTGCCGTTGTGATCATTGCACTTGTCAATATTGGCTTGACATACATTCAGCTATCTGTGGAAGACCATGAGTGGTGGTGGAGATCTGTGCTATGTGGTGGCTCAACAGCCATTTTCATGTTCGGGTATTGTATCTACTTTTATGTGAGATCAAATATGACTGGATTGTTGCAGGTGTCCTTCTTCATTGGCTATAATGCATGCTTATGCTATGCTTTCTTCCTTATATTTGGTGCCATCAGTTTCCAAGTTTCATTGCTATTTATTCGCCGGATATACCATGATGTTAAAAGAGAGTGA 1773 0.4174 MAKPHHLILLLLLCATLQSSLSIAASPSDHLYNVGDVVPFFVNKVGPFNNPSETYEYYDLPFCTPDPIVKKKESLGEVLNGDRLSNALYEFKFREDKNGATLGQKKLTIDQVAIFKQAINREFYFQFYLDDLPFWGFIGKLEEDGLIPGGGGSNYYLFTHVLFDVLYNGNQVVQVNAIGDPNHAVDITNDVGVNVEFTYSVIWNATKLRFENRMDRYSRASLLPVSSQVHWFSLVNSIVIILLLIGLLALLYMRHLKSDLKKYSNASEEDKEVGWKSIHGDVLRPPPNSSLLFAVVGTGTQLLILLCVLLFLALIGTLYPYNRGGLLNWLVILYALTSVFSGYTAASFHGQFAEIGWERSVSLAGILYTGPVFVAASILNIIAISYRATAGLPVGSIVVILILFTFLSVPLLAFGGVLGFRFRSKLQSPSSTKRYPRDIQQLAWYWRTPFQMFIGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFATFITAVVIIALVNIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYCIYFYVRSNMTGLLQVSFFIGYNACLCYAFFLIFGAISFQVSLLFIRRIYHDVKRE* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1240 590 Pfam Endomembrane protein 70 54 545 IPR004240 GO:0016021
Apr3g1240 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 12 589 - -
Apr3g1240 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 12 589 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1240 Apr-Chr3 26873754 26877811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1240 9 590 Miscellaneous Gene Families AT2G01970 47.700 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1240 K17085 - gmx:100818419 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1240 3 26873754 26877811 Apr3g1240 3 26873754 26877811 ECH