Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1233 ATGGCGGTGAGGGCCACAGTGTTGCGCTTTCCGATGGACACTGACGCGCGCGAAGGCTCCGGCCTCCTCTGGGGAGTCACCGTCACGCCCTTCGCCGCCGTCAACGAAGACGGCCAATCGCCGGCGTACGGCTCCGGGGGCGACCTCTTGCCCCGATGCGAGAACTGCTGGGCCTACTTCAACACCTACTGCGAGCTCGAACAGTGGTCTTGGTCTTGCTCTCTCTGCGGCAACCTCAACGGCCTCTCTTCCGAAGCTATCGAACGCTACTCTCGTCCTCAATCTTGCGCCGAGATGATGTCCTCTTTCGTAGATCTCGAATTGCCTTCACAAGAATCGTCGGAGGTAGCCGAAATGCAAGCGTGTCCGGTTTATGTTGCTGCTGTTGACTTGTCCTCTTCAGAGGAGTTCATAGAACTTACCAAAAGTGCATTGCTGGCAGCTCTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGACTCTATGATGTTCAAGGTCCAATACCTGTTGTGAAAAATGTTTTCATCCCTCCCGATGCAGAGGGAACCTTACCTATTGAGCTTGAGGATGCCATGCCTTTGTTACAGTTTCTGGCTCCTGTGGAAACATGCAAGGACCGTATTGCGTCTGCACTTGAAACACTTAGACCAACAACTTCGTGGGAGAGAACCACATCAGGTCAAGGCCTGGATGGTGTCCTGATAGGTGGGCGTGGTTTTGGGATGGCAATGGAAGCCCTTTGCAATTACCTTGGATCTGAATATGGAAGCACTTTTGCTTTAGCTAGAATCTTTGCCTTCTTGTCTGGCCCCCCTGATTTTGGAGCTGGACAATTGGACACAAGACGATATGGTGAGCAATATGCAAGCAAAAGAGAGGATGCAGATCGTGCTTTACTCCCAGAGCAGACACCCTTTTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTACACTGATTTGGCATCCCTGAAATTTTTGAGCATTGAAAGTGGGGCTTCCTTATTTTTATATACAAGTACCGAGGATTCAACTTTGCCTCAGGACATGTATCGAATGCTAAGTCGACCATATGCTTTTGGTTGTGTCTTGCGGTTAAGAACTTCAACTGAATTTAAACCTGGCAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACATCATATGTTGTGATTCTTATGCTACATATGCTTATGACTTTGTGTTTGAGAACAACACCGGATTTTCAAGAAATAAGTCAGATGTTCCTACAATTCAAATTGCATTTCAGTATGCAGTTGTAGTTCCTCCTCAGGATGATTCTGGAGGGGTTTCTACAAGTAGAACCAAGCATTCCCTTCAACGTCGGCTAAGGATACGAACTTTGCAGTTTGGTGTTGCTCAGAACATTCATGAACTTTATGATAGCTGTGATCCTGAAGTTGTTCTATCTTTGCTTGTTCACAAGGTTATATTAGCCTCTTTGGAGGAAGGAGTTCGGGAGGGTAGAATTTTACTTCAAGAATGGCTAGTGATCCTCACAGCTCAGTACAATGATGCATATAAACTTATCCAGTATAGTGATGGAAGTTCCATAAGATCTCAGATTGATGTTGCATTTTCTCAATGTCCTCAATTGCAGCCCCTACGGCGCCTAATTTTTGCTCTCCTTCGAAATCCTCTTCTCCGCTTTCATGAAGAAGGTGTTCACCCTGATTTTCGCATCTATCTTCAATGCCTTTTCAGCGGGTTAGAACCCAGTTCCCTTCATCGTGCTGTGTATCCTGTGTTGACATCATATGCTACTCCGGATAAACAAGCATATCCTCGCCATTCATTGAGTCGTGCAGCATTGATTACCAGTGGCAGTCCGATATTTTTCCTTGATGCTTTCACAATTCTGATTGTGTTTTATTCTTCGACTGCAGACCCTACACTACCTTTTCCTCCACCCCATGATTGTTTATTAAGGACCACAATCAACAAATTGAAGCAAGAGAGATGCATTACTCCTAAACTCATTTTTATTCGTGGAGGGCAGGATGATGCCTCAATTTTTGAGAACTATCTGATAGAAGAGCAGGACGTTGATGGAAGTGGTCTTACAAGTGTGATGGGTTTTGTTTCCTTCCTTGAGGATATTACTCAGAAAGTTTTAGAATTCATGAAATAG 2229 0.4527 MAVRATVLRFPMDTDAREGSGLLWGVTVTPFAAVNEDGQSPAYGSGGDLLPRCENCWAYFNTYCELEQWSWSCSLCGNLNGLSSEAIERYSRPQSCAEMMSSFVDLELPSQESSEVAEMQACPVYVAAVDLSSSEEFIELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEGTLPIELEDAMPLLQFLAPVETCKDRIASALETLRPTTSWERTTSGQGLDGVLIGGRGFGMAMEALCNYLGSEYGSTFALARIFAFLSGPPDFGAGQLDTRRYGEQYASKREDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGASLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNTGFSRNKSDVPTIQIAFQYAVVVPPQDDSGGVSTSRTKHSLQRRLRIRTLQFGVAQNIHELYDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQYSDGSSIRSQIDVAFSQCPQLQPLRRLIFALLRNPLLRFHEEGVHPDFRIYLQCLFSGLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRTTINKLKQERCITPKLIFIRGGQDDASIFENYLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1233 742 PANTHER OS05G0443300 PROTEIN 1 740 - -
Apr3g1233 742 Gene3D - 30 101 - -
Apr3g1233 742 SUPERFAMILY vWA-like 123 376 IPR036465 -
Apr3g1233 742 SUPERFAMILY Helical domain of Sec23/24 497 613 IPR036175 GO:0006886|GO:0006888|GO:0030127
Apr3g1233 742 SUPERFAMILY Zn-finger domain of Sec23/24 48 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Apr3g1233 742 Pfam Sec23/Sec24 helical domain 497 609 IPR006900 GO:0006886|GO:0006888|GO:0030127
Apr3g1233 742 Gene3D Sec23/Sec24 helical domain 468 626 - -
Apr3g1233 742 Gene3D von Willebrand factor, type A domain 122 378 IPR036465 -
Apr3g1233 742 SUPERFAMILY beta-sandwich domain of Sec23/24 3 496 - -
Apr3g1233 742 PANTHER SEC24-RELATED PROTEIN 1 740 - -
Apr3g1233 742 Pfam Sec23/Sec24 trunk domain 122 373 IPR006896 GO:0006886|GO:0006888|GO:0030127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1233 - - gmx:100807557 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1233 3 26817441 26825234 Apr3g1233 3 26817441 26825234 ECH