Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1223 ATGAGGCCAATTCAACTTCCTGAGCCGCCGAGCCCTACCGCACGGAGAGGAACTCCTGATATCTTCGAATCTGGACTTCACACCTTCGTTCGACGCGCCGTCGTCATCGGCAACGGTTTCCCCGCATCGGAGAATCAGAGCATCGGATTGGTTCGCGCCCTTGGCCTCTCAGATAAGCACATCTTATATCGGGTTACCAGGCCAAAGGGGGGAGTTAATGAGTGGCTTCAATGGCTTCCAGTCACTGTCCATAAAAAAATATATTATATAGTAAGAATGATTCGCGGTTATTCTCAGCTTCTGTTGAAATCTCAAGAAAAGAAGCATGTTCCTTTACCTTCAGAAAATGGTCTCAGTGCAGGCTTGTTGGCTGTCTTAGAAGCTGATGTAAAGAAGATAGTAAATTTTGCTCGTGAAACTTACGAAAAGGAGGGCCCTTTGTTGGTGGTAGCATGTGGAAGGGATACCATTTCTACTGCAAGTTCCATAAAACGTTTAGCATCTGAGAATGTTTTTGTTGTTCAGATACAACATCCAAGATTTCATTTGAATAGGTTTGACATGGTGATTACCCCTAAGCATGATTATTATCCATTGACTCCAGAAGGACAGAAACAGGTTCCCCGGTTTCTTCAAAGTTGGATAACTCCTCGTGATCCTCCAGAAAGTCATGTGGTGCTCACAACGGGGGCACTACATCAAGTAGATTTCACTTCATTACGCAGTGCTGCTGTTACTTGGCATGATGAGTTTGCACATGTTCCCAGACCCTTGCTCGTTGTCAACATTGGAGGACCAACAAGCAACTGCCGATATGGTGTAGACCTTGCCAAGCAGTTAGCAGCCTCTTTGCTAAGCGTTCTTGTTAGTTGTGGGAGTGTTAGAATATCCTTTTCAGAGAGAACTCCACCAAAGGTGTCCAATGTTATAGTGAAAGAACTTGGGAATAATCCAAAAGTTTATATTTGGGACGGGCAAGGACCTAACCTGCACATGGGCCATCTAGCTTGGGCTGATGCATTTGTTGTCACTGCTGATTCAGTCAGCATGATAAGTGAAGCTTGCACCACTGGGAAGCCTGTTTATGTTGCGGGAGCCGAGCGGTGCAGATGGAAGTTCACCGAATTCCACAAATCTTTGAGAGAGCTGGGGGTTGTTCGGCCTTTTACAGGTTCTGAGGATATATCAGAAAGTTGGAGTTATCCACCCCTTACAGGTACTGCGGATGCTGCCAAACGGGTTCATGAAGCGCTTGCTGCCCGAGGGTGGAAACTGAAGATATAG 1284 0.4611 MRPIQLPEPPSPTARRGTPDIFESGLHTFVRRAVVIGNGFPASENQSIGLVRALGLSDKHILYRVTRPKGGVNEWLQWLPVTVHKKIYYIVRMIRGYSQLLLKSQEKKHVPLPSENGLSAGLLAVLEADVKKIVNFARETYEKEGPLLVVACGRDTISTASSIKRLASENVFVVQIQHPRFHLNRFDMVITPKHDYYPLTPEGQKQVPRFLQSWITPRDPPESHVVLTTGALHQVDFTSLRSAAVTWHDEFAHVPRPLLVVNIGGPTSNCRYGVDLAKQLAASLLSVLVSCGSVRISFSERTPPKVSNVIVKELGNNPKVYIWDGQGPNLHMGHLAWADAFVVTADSVSMISEACTTGKPVYVAGAERCRWKFTEFHKSLRELGVVRPFTGSEDISESWSYPPLTGTADAAKRVHEALAARGWKLKI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1223 427 Pfam Mitochondrial fission ELM1 43 418 IPR009367 -
Apr3g1223 427 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 135 366 - -
Apr3g1223 427 PANTHER OS02G0535700 PROTEIN 1 426 IPR009367 -
Apr3g1223 427 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1223 Apr-Chr3 26744777 26749736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1223 - - gmx:100777791 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1223 3 26744777 26749736 Apr3g1223 3 26744777 26749736 ECH
Apr2g2082 2 26120307 26123458 Apr3g1223 3 26744777 26749736 PCT