Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1222 ATGACGAGGGTATTGGTTCAGAGGGGCTCTTCTGGCGGTTCTTCGTCGAACGCGAGCCGGAGTTCTGCGGCGTCCTCGTCGTCTTCTTCTGCGCGGGTTGAGGTGCAGAGTGGGGAAGAGGTTGTCGGGGATGAGGTTTTGGAGAGTGGTGATAAGGGAAAGTGTGAGGATGTTTTTGAGCAGAGTGATGATGAAATGGCTGCTGTTGTTGAGAATGATGTTAGGGAGGAGATTGTGAGAGGGTTGAGTGGAATTAGAGCTTCTTCAGAAATTGAGGGTTCCAGTGTGGATCCTTCTTTAGTTCCAGCTAGTGGTGGTTCTTGCCCCCCACCGCCCCCTGTTCCGCCCCCTAAGCCTGCTGGAGCTAACTTGAATTCAAGGAGGAGTGTGTCGGGGAGTTCAAATTTTAATTCCGGTTCTGTAGGATCTTCGAGGAGAGGATCTGCGTGGCCTGTTGTCTCGGCTAGGACTTCGCCGGCTGGGTCGCGGCCATCTTCTCCCAGGTCTCTTAATGAAAGTGAGGGGTACAATAGTGCTGATGAACAGAAGCCCTGCTTTGTTTCATCTTATGATGATTTTGAAAGAGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAAAATGACAGAAGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGAGACTCTGACGCGTATGATGTGGTCAGACAGATGTGCATAGATTATATGGAGCGGGAGAGAGATCATTTTTCTCAGTTTATAACGGAAGGTTTCATGTCATACTGTAAGAGAAAAAGAAGAGATAAGGTCTATGGGAACAATGTTGAGATCCAAGCCATTTGTGAAATGTACAATCGTCCAATTCATATATACTCCTACAGTACAGAACCTATTAATAGCTTCCATGGAAGCTATACCACTGACACACCACCTATTCGACTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGACGCTTGACAATTGGTGCAGGACTTGGGTTCAGCTGTCTTCGTGGAACTAATGTTGACACAGATCAAGTCAAGGCTGCTATTAAAGCTCAACAAGACCAACAGATCAATAATGCACTTTTAGCTGAGGGTCGGTTTTACTCTGATCTTGAGCTCACAGAGAAGGAAATTGAACGCATGGTGATGGAAGTTTCTCGAGCTGAGTATCTTGCAGATGGTGATAGTGCATTTAAGCAACAGCTTGGTGACAGGGAGTCCTCTACCTCAAATGCTGAACCATCATCTTCTGGTGCACGATCATCCGGCACTGATGGCAATATGGAACATGGAAAAGAGCACGGTGCTGATCTCAGTAGCGGTATGCGGATGCTACTATCAATGGGATTTAGTTACATCCAAGCTGTTGAGGCTTACAGCATATTTGGGGATGATGTTGATTCTATGGTTTGTTACCTGTTAGATAGTGGCAGTAGCAGCAGACTTAAAGGCAAGGCCACTGAATGA 1500 0.462 MTRVLVQRGSSGGSSSNASRSSAASSSSSSARVEVQSGEEVVGDEVLESGDKGKCEDVFEQSDDEMAAVVENDVREEIVRGLSGIRASSEIEGSSVDPSLVPASGGSCPPPPPVPPPKPAGANLNSRRSVSGSSNFNSGSVGSSRRGSAWPVVSARTSPAGSRPSSPRSLNESEGYNSADEQKPCFVSSYDDFERERQFEIDIRRAKGYEVKKMTEDGNCLFRAVADQVYGDSDAYDVVRQMCIDYMERERDHFSQFITEGFMSYCKRKRRDKVYGNNVEIQAICEMYNRPIHIYSYSTEPINSFHGSYTTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSCLRGTNVDTDQVKAAIKAQQDQQINNALLAEGRFYSDLELTEKEIERMVMEVSRAEYLADGDSAFKQQLGDRESSTSNAEPSSSGARSSGTDGNMEHGKEHGADLSSGMRMLLSMGFSYIQAVEAYSIFGDDVDSMVCYLLDSGSSSRLKGKATE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1222 499 MobiDBLite consensus disorder prediction 1 35 - -
Apr3g1222 499 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 446 487 IPR015940 -
Apr3g1222 499 MobiDBLite consensus disorder prediction 411 447 - -
Apr3g1222 499 MobiDBLite consensus disorder prediction 104 120 - -
Apr3g1222 499 Gene3D - 191 342 - -
Apr3g1222 499 PANTHER OTU DOMAIN CONTAINING PROTEIN 98 459 - -
Apr3g1222 499 MobiDBLite consensus disorder prediction 84 182 - -
Apr3g1222 499 MobiDBLite consensus disorder prediction 412 435 - -
Apr3g1222 499 ProSiteProfiles OTU domain profile. 209 332 IPR003323 -
Apr3g1222 499 Pfam OTU-like cysteine protease 216 326 IPR003323 -
Apr3g1222 499 MobiDBLite consensus disorder prediction 124 151 - -
Apr3g1222 499 SUPERFAMILY Cysteine proteinases 197 332 IPR038765 -
Apr3g1222 499 MobiDBLite consensus disorder prediction 1 54 - -
Apr3g1222 499 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 98 459 - -
Apr3g1222 499 MobiDBLite consensus disorder prediction 158 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1222 Apr-Chr3 26736060 26742091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1222 K12655 - gmx:100809162 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1222 3 26736060 26742091 Apr3g1222 3 26736060 26742091 ECH