Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1221 ATGGCGCCAAGGAAACCTCGCGACCGTGAAATGCTATTCGACTCCGTCATCGCTCTCGTCTTCATCCTCGTCGCTTGCGTCGACCTCTGCGACGGCGCCACCGTCGTCGACGTCTACCGCCTCATCCAGTACGACATGTCCGGCGTTCCCTTCGGATCTCGACTAGCTAGTCTCAACCACCACGCCGCTTCTCTTCACTTCTCGCCTCACGCCGATCTCTCTCGCACCGTCCTCCTCATACCTCTTCGCGAACTTAACTTGTCCTTTGTCAAAGAATATATTGCTGAAAGCAAACCTCTTGGGGGTTTAATATTTTTGCTGCCACGGATGTTCAGTTTTGAAAACAAAGGTGGTATGGGAAGTAATCTTGAAGATGGGAGTAAAGAACTGCTGAAGGATACATTGGCTGAACTTGAACAAGTACTTATACATACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGACGACAACATTGATGCTGTGTTAACTGACATAAAAAAGAATGATGCCACTGGTCAACCTGCTACTGCTACAACTGGCGGATACAAATTTGTTGTTTCAGCTCCTGAACCCAAGAAACTTGTATCTCCACCCATTACAAATATTCAGGGATGGTTGGCAGGACTGAAGACAGATGATGATGCTCATCAATTACCCACAATTGTGATAGTGGCATCATATGACACTTTTGGGGCTGCTCCTGCATTATCAGCAGGAAGCGATAGCAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGGTTATTTTCTCTATTATATTCTAATCCAAAGACGAGAGGACAATACAATCTGCTGTTTGGGCTCACTTCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGTGGCTTTGGAGCTTTGACCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGTTCCTGGGAAAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGCCTATATTAAGAAAATTCTGGATGATTTTTCAAGTGTTGCAGAAGAATTAGGCTTTACAGTGAATCTGAAGCATAAGAAAATAAACATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAATTTTCAAGGCTGAGAGTTACTGCTGCCACTCTATCTGAACTTTCTATGGCACCTGAATTATTAGAACGAACTGGTGGTTTGGTTGACAGCAGGCAATTTGTCAATGAAGCTGCCATTGTCAGAAGTGTGAAATTAATTGCTGAGAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACATCCAGATCTTTGCGGACAACAGTAACTTGGCTGTAAATCCTTCTTATATTCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGTGTAGCTCCATTTTTCTCAAAAGATGATCCTTTTGTCATGGCACTGAAAAAGGAATTAGAGGATCATACTGATGAGGTAAATCTGCAACGAGAAGTGCTGGATGGGATGTTCACTTTCTATGATTCAACTAGGGCAAACCTGAATATATATCAGGTTGCCAGTGTCACATTTGATTTGCTGCTGCTTCTAGTAGTGGGATCGTATTTGATTGTGCTCTTCAGTTTCTTGGTCATCACAACAAAGGGTCTTGATGATCTAATCAGCCTATTTCGACGGCCTCCCTCTCGAAAAGTGAAAACTGCATAG 1689 0.4328 MAPRKPRDREMLFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNLSFVKEYIAESKPLGGLIFLLPRMFSFENKGGMGSNLEDGSKELLKDTLAELEQVLIHTNLPYPVYFAFEDDNIDAVLTDIKKNDATGQPATATTGGYKFVVSAPEPKKLVSPPITNIQGWLAGLKTDDDAHQLPTIVIVASYDTFGAAPALSAGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLWSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAYIKKILDDFSSVAEELGFTVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSMAPELLERTGGLVDSRQFVNEAAIVRSVKLIAESLARHIYGHQGKNIQIFADNSNLAVNPSYIRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLQREVLDGMFTFYDSTRANLNIYQVASVTFDLLLLLVVGSYLIVLFSFLVITTKGLDDLISLFRRPPSRKVKTA* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1221 562 Pfam Nicastrin 222 360 - -
Apr3g1221 562 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Apr3g1221 562 CDD M28_nicalin_like 135 428 - -
Apr3g1221 562 SUPERFAMILY Zn-dependent exopeptidases 187 386 - -
Apr3g1221 562 PIRSF Nicalin 3 557 IPR016574 GO:0009966|GO:0016020
Apr3g1221 562 PANTHER NICALIN 8 561 IPR016574 GO:0009966|GO:0016020
Apr3g1221 562 Gene3D Zn peptidases 126 421 - -
Apr3g1221 562 Coils Coil 473 493 - -
Apr3g1221 562 ProSitePatterns EF-hand calcium-binding domain. 243 255 IPR018247 -
Apr3g1221 562 PANTHER NICALIN 8 561 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1221 5 560 EF-hand Containing Proteins AT3G44330 73.036 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1221 - - gmx:100778865 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1221 3 26725473 26735125 Apr3g1221 3 26725473 26735125 ECH