Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1219 ATGGCTGCTACTTCAAATTCAGAACCACCGCATCCAACTTCAACCACCACCATAACCACCCTACATTCCGATATCATCCACACGCACATCCTCACACGCCTCGACGGTGCCACGCTGGCATCAGCTGCATCCGTATCAACTCTAATGAACCGCCTCTGCACCGAAAATTCTCTCTGGCGTAACATTTGCACATCCACATGGCCTTCCCTCGTCGACCCCACCGCAACACACGTAATCTCCACCTTCCCCGGCGCGTACCGTTCCATTTTCTCGGACGCGTTCCCTTCCCTCCACTACTTCTCTCCCCGTCCTCACCGCCCGTCTCCTCCGCCGTCGGAGCTCATATCCGCCATTGACATATACTACAAGGGAAAGCCGGTGTTCTCGAGAGTGAGATGCACCGAAACGCAGAAGAACTGGTTCCTCTTGTCGCCGCTGTGGGTTGACGCGCTCGAGCCGGAGGAGGTGGTTCCGACGCCGGTGAAGTTCACGAGAAAGGACGAGGAGTTGTTGAAGCAATTGGAGGATAATTTAAGCCTGAGCTGGATCGTGATGGATCCGAGAGAGAAGCGCGCGGTGAATGTATCGAGCCGGAGAGCGGTGTCGGTGCAGCGGCACTGGCTGACGAGGGAGGTGGAGGTGGTGTACGCCGCGGTGATGGCGGGGGAGAGGGAGCGTGCGACGGAGATGGTGCAGTGCGTGGTGAAGGTCACGTGCTGCGGAAAGGTGGGGGGTGAGTTGCACGTGAAAGAGGTGAATTTGATGATGGAAGACACGGAGGGGAGGCACGTGAGTGGGAAAGAGGCATTGGGGATTCTTCAAAGTGCGATGGAGTTTGGAGAGAGAAAGAGTTTTGATGGAGTTGAAGCGAAGGAGAGGTACGAGAAGTTCTCGTGCATGATGAAGGAAAGAAGAGTTATTAAGCACAGGAGACAGAAGGCACGTGACCTTCTTGCTATGCTCCTTGCCTTCATTGCTTTCCTCTTGTTTTGCTTCCTTGCTGGACTCTGA 1011 0.5519 MAATSNSEPPHPTSTTTITTLHSDIIHTHILTRLDGATLASAASVSTLMNRLCTENSLWRNICTSTWPSLVDPTATHVISTFPGAYRSIFSDAFPSLHYFSPRPHRPSPPPSELISAIDIYYKGKPVFSRVRCTETQKNWFLLSPLWVDALEPEEVVPTPVKFTRKDEELLKQLEDNLSLSWIVMDPREKRAVNVSSRRAVSVQRHWLTREVEVVYAAVMAGERERATEMVQCVVKVTCCGKVGGELHVKEVNLMMEDTEGRHVSGKEALGILQSAMEFGERKSFDGVEAKERYEKFSCMMKERRVIKHRRQKARDLLAMLLAFIAFLLFCFLAGL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1219 336 PANTHER F-BOX PROTEIN-RELATED 14 331 IPR045283 -
Apr3g1219 336 Gene3D - 6 141 - -
Apr3g1219 336 PANTHER F-BOX PLANT-LIKE PROTEIN 14 331 - -
Apr3g1219 336 SUPERFAMILY F-box domain 9 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1219 Apr-Chr3 26707021 26708228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1219 - - ccaj:109798917 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1219 3 26707021 26708228 Apr3g1219 3 26707021 26708228 ECH
Apr2g2078 2 26095114 26096695 Apr3g1219 3 26707021 26708228 PCT