Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1216 ATGGCACTTGTAACGACGAACCCAACCATCAACGAGGGTCCTCTGTTCGCCGAGGTAGACATGAGTTCCGATTTCAACGCCCCCACTATTCGAGCCACCGTTGTCCAAGCCTCCACCATCTTCTACGACACTCCTGCCACCTTAGATAAGGCTGAGAGGTTGTTGGCTGAAGCTGCTAGTTATGGATCCCAGCTTGTGGTGTTTCCAGAAGCGTTTGTTGGTGGGTACCCGCGTGGTTCAGTTTTCGGTGTTTCCATTGGAAATCGCACGGCCAAGGGTAGAGAGGAGTTCCGCAGGTATCATTCTGCCGCTATTGATGTGCCTGGCCCTGAAGTGGATAGATTGGCAGCAATGGCTGGGAAGTATAAAGTACATTTAGTGATGGGTGTGATAGAGAGGGATGGCTACACACTTTATTGTACAGTTCTCTTCTTTGATTCTCAAGGTCGTTACCTTGGAAAGCACAGGAAAATCATGCCAACAGCATTGGAGCGGGTTATATGGGGATTTGGGGATGGATCAACCATTCCAGTGTTTGAAACTCCCATTGGAAAAATAGGTGCTGCCATTTGTTGGGAGAACAGAATGCCACTATTAAGAACAGCAATGTATGCTAAAGGTGTGGAGATATATTGTGCTCCTACAGCAGATGCCAGGGATGTGTGGCAAGCATCAATGACCCATATTGCTCTTGAAGGTGGATGTTTTGTTTTGTCAGCAAACCAGTTCTGTAGAAGGAAGGATTACCCACCTCCTCCAGAGTATGTTTTTGCTGGCACAGAAGAGGACCTGAATCCGGAATCTGTTGTATGTGCCGGGGGTAGTGTCATTATATCACCATCAGGGGCTATTCTGGCTGGACCAAATTATGATGGGGAGGCACTCATCTCAGCAGACCTAGATCTTGGAGAAATAGCGAGAGCTAAGTTTGATTTTGATGTGGTTGGACACTATTCAAGGCCTGAAGTGCTCAGCTTGATTGTCAAGGACCATCCAACAAACCCAGTTACTTTTACATCAACATCTACAAAAGTTGAAGATAAGACCAAGTAG 1053 0.4691 MALVTTNPTINEGPLFAEVDMSSDFNAPTIRATVVQASTIFYDTPATLDKAERLLAEAASYGSQLVVFPEAFVGGYPRGSVFGVSIGNRTAKGREEFRRYHSAAIDVPGPEVDRLAAMAGKYKVHLVMGVIERDGYTLYCTVLFFDSQGRYLGKHRKIMPTALERVIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGVEIYCAPTADARDVWQASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFAGTEEDLNPESVVCAGGSVIISPSGAILAGPNYDGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLIVKDHPTNPVTFTSTSTKVEDKTK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1216 350 CDD nitrilases_CHs 30 328 IPR044149 GO:0003824
Apr3g1216 350 PANTHER NITRILASE 14 344 - -
Apr3g1216 350 Pfam Carbon-nitrogen hydrolase 31 309 IPR003010 GO:0006807
Apr3g1216 350 Gene3D - 18 314 IPR036526 -
Apr3g1216 350 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 30 302 IPR003010 GO:0006807
Apr3g1216 350 PANTHER NITRILASE 14 344 IPR044149 GO:0003824
Apr3g1216 350 SUPERFAMILY Carbon-nitrogen hydrolase 28 329 IPR036526 -
Apr3g1216 350 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 62 77 IPR000132 GO:0003824
Apr3g1216 350 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 187 200 IPR000132 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1216 K13035 - gmx:100778110 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1216 3 26691096 26694713 Apr3g1216 3 26691096 26694713 ECH