Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1206 ATGTCTACCAAGGACTGCGGCCATCACGAACACGAGCGCCGCCACCTCCTCCGCCACGTACTCGCCGGCATCATCGCCTTCATCGTACTTATCCTCCTAATAATCTTCCTAATATGGATCATCCTAAGACCCTCAAAACCTCACTTCGTGGTCCAAGACGCCACCATCTACACCTTCAACCTCTCTTCCACAACCGAACCTTCTCTTTCTTTCAACACACTCACACTCACCATGCAAATCACACTCTCCGCTCATAACCCTAACGACCGCATCGGAATATACTATCACAACCTTAACCTCTACGCCTCTTACCGTAGCCAACAAATCTCTCTCGCCACCGCCATTCCCGATGCCTATCAAGGCCACAAGGACTTCACCGTTTGGTCGCCGTTTCTCTACGGTAACGCCGTTCCCGTTTCGCCGTTTGTGTTGGGTTCTTTACAGCAGGACCAAAGTGCCGGCGCCGCTTTGGTCAACGTCAAGGTTAACGGAAGGGTTAAGTGGAAAGTTGGGACTTGGATCTCCGGCAGGTACCATATTTATGTTAACTGTCCTGTGTATATTAGGTTCGCCGGAGATCGGGATAATGCTATCGGAGTTGTCGCTCCGGCGGTGAAGTTTCAGCTCTTGCAAAGTTGCAGTGTTGATGTTTAG 654 0.5076 MSTKDCGHHEHERRHLLRHVLAGIIAFIVLILLIIFLIWIILRPSKPHFVVQDATIYTFNLSSTTEPSLSFNTLTLTMQITLSAHNPNDRIGIYYHNLNLYASYRSQQISLATAIPDAYQGHKDFTVWSPFLYGNAVPVSPFVLGSLQQDQSAGAALVNVKVNGRVKWKVGTWISGRYHIYVNCPVYIRFAGDRDNAIGVVAPAVKFQLLQSCSVDV* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1206 217 PANTHER OS05G0367900 PROTEIN 5 217 IPR044839 GO:0098542
Apr3g1206 217 Pfam Late embryogenesis abundant protein 81 184 IPR004864 -
Apr3g1206 217 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 5 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1206 Apr-Chr3 26606165 26606818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1206 14 188 EF-hand Containing Proteins AT5G21130 22.727 3.89e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1206 - - gmx:100812905 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1206 3 26606165 26606818 Apr3g1206 3 26606165 26606818 ECH
Apr2g2074 2 26043659 26044426 Apr3g1206 3 26606165 26606818 PCT