Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1202 ATGGAAAAGCAAGATGGGAAGAGAGTGGTGATTCTAGGAGGTGGTGTCGCCGGTTCCATCCTCGCTAAATCTCTTCAATTCCATGCCCATGTCACCCTCATTGATCCGAAGGAATATTTTGAGATTTCATGGGCAAGTTTGAGGGCAATGGTTGAGCCATCCTTTGCAGAGAGGTCGGTGATCAACCATAGAGATTACCTTACCAATGGCAACATTGTTGTGTCCAGTGCCGTCAATGTGACCGAAACCGAAGTGTTGACGGCTGATGGTCATCGGATTGAGTATGACTATCTTGTTATTGCCACTGGCCATGCCGATCATGTCCCCAAAACTAGGAGTGAAAGACTTAATCAGTTCAAAGAAGAAAATCAAAAGATAAAATCTGCCAGTTCCATTTTGATTGTTGGAGGAGGCCCCACTGGCGTGGAACTTGCTGGAGAGATAGCCGTTGATTTTCCAAATAAGAAGATTACCCTAGTGCACAAAGGATCAAGGTTACTGGAATTCATTGGGGCAAAAGCTGCTGATAAGACTCTAAAATGGTTGACATCAAGGAATGTCACAGTAAAACTAGAGCAATCAGTTGACTTAAACGCTGCCACAGATGGACGGAAGATATATCAAACTTCACACGGAGAGACCATTGAGGCAGATTGTTATTTCTTATGCATAGGGAAACCGCTTTCTTCAGCATGGCTTAAGGAAACTGTGTTGAAGAATGACTTGGATGTTCAGGGAAGGATTAAGGTGGATGACCGTCTGAGAGTCAAGGGTCGGAGCAACATTTTTGCAATTGGAGATATTACAGATATTCCAGAACTCAAGCAAGGGTTTTTGGCACAGCAGCAGGCTGCAGTGGTTGTGAATAACTTGAAGGTGATGATAGAGGGAGGAAGAGAATGTAGGATGGAATCTTACAAACCACATTCAGCAATGGCAGTAGTTTCACTTGGTAGGAAAGATGCAGTGGCACAGCTTCCATTCGTCACACTCGTTGGAAGAGTTCCTGGCTTCATCAAGTCTGGAGATTTGTTTGTTGGTAAAACAAGAAAGCAAATGGGACTCGACCCTCATCCTATACAAGCTTGA 1089 0.4417 MEKQDGKRVVILGGGVAGSILAKSLQFHAHVTLIDPKEYFEISWASLRAMVEPSFAERSVINHRDYLTNGNIVVSSAVNVTETEVLTADGHRIEYDYLVIATGHADHVPKTRSERLNQFKEENQKIKSASSILIVGGGPTGVELAGEIAVDFPNKKITLVHKGSRLLEFIGAKAADKTLKWLTSRNVTVKLEQSVDLNAATDGRKIYQTSHGETIEADCYFLCIGKPLSSAWLKETVLKNDLDVQGRIKVDDRLRVKGRSNIFAIGDITDIPELKQGFLAQQQAAVVVNNLKVMIEGGRECRMESYKPHSAMAVVSLGRKDAVAQLPFVTLVGRVPGFIKSGDLFVGKTRKQMGLDPHPIQA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1202 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Apr3g1202 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 113 - -
Apr3g1202 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 131 149 - -
Apr3g1202 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 217 233 - -
Apr3g1202 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 247 269 - -
Apr3g1202 362 SUPERFAMILY FAD/NAD(P)-binding domain 2 273 IPR036188 -
Apr3g1202 362 PANTHER APOPTOSIS-INDUCING FACTOR 1 6 358 - -
Apr3g1202 362 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 275 IPR023753 GO:0016491
Apr3g1202 362 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 6 358 - -
Apr3g1202 362 Gene3D - 5 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1202 Apr-Chr3 26568499 26573050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1202 9 275 EF-hand Containing Proteins AT4G28220 23.460 6.49e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1202 K22745 - gmx:100818210 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1202 3 26568499 26573050 Apr3g1202 3 26568499 26573050 ECH