Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1201 ATGGTGGAGAAGAAAGTGGTCATCGTAGGAGGTGGTGTCGCCGGTGCTGTCCTTGCAAAAAATTTGCAAAATCAGGCCAACGTCACCCTTATTGATCCGAAAGAATATTTTGAGATTCCATGGGCAAGCTTGAGGGGATTGGTTGAGCCATCCTTCGCTGAAAGGATAGTGATCAACCATAGAGAGTACTTCAAAAAAGGTGACCTTGTTATATCAAGTGCTGTCAACATAACTGAAACTGAAGTCTTCACTGCAGATGGTAGTCAGATTCCCTACGACTACCTTGTTATTGCCACCGGCCACACAGAACATATACCAAAAACCAGGAGTGAAAGACTTGACCAATACAAAGGAGAAAATACAAAGATAAAGTCTGCAGGTTCAATTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCAGAAATTGCTGTTGATTTTCCTGATAAGAAGGTCACTATAGTGCATAAAGGATCAAGGTTGTTGGAATATATTGGGCCAAAAGCTTCAAGGAAGACTTTGAAGTGGCTTAAATCAAAGAAAGTTGACGTGAAACTAGAGCAATCGGTTGAGTTGAACTCCACTAATGAAGAAAATCGGACATATCAAACTTCACTTGGTGACACTATAGAAGCAGATGCTTATTTTCTATGCATAGGGAAACCACTTGGTTCAGCATGGCTTAGAGAGACATTTTTAAAGGATGACTTGAATGCTGATGGAAGGATCGAGGTTGATGAACACTTGAGAGTGAAGGGTAGGAGCAACATTTTTGCAATTGGAGATATTACAGATGTTCAAGAAATCAAACAAGGGGTGTACGCACAAGGTCATGCTCAATTGGTTGCCAAAAACCTGAAGCTGTTGATAGAGGGAGGAGGCAAAGAGCGTAAATTGGGAACATACAAGGCACAACCACCAATATCTATTGTTTCACTGGGAAGGAAACATGGGGTTGCACAATTCCCATTCATGACGATCATTGGAAGGTTTCCTGGCATGATCAAATCAGGGGATTTATTTGTGGGGAAAACGAGAAAGGAATTAGGACTCGAACCTAATGTTAAAAAATCTTAA 1083 0.4146 MVEKKVVIVGGGVAGAVLAKNLQNQANVTLIDPKEYFEIPWASLRGLVEPSFAERIVINHREYFKKGDLVISSAVNITETEVFTADGSQIPYDYLVIATGHTEHIPKTRSERLDQYKGENTKIKSAGSILIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLKWLKSKKVDVKLEQSVELNSTNEENRTYQTSLGDTIEADAYFLCIGKPLGSAWLRETFLKDDLNADGRIEVDEHLRVKGRSNIFAIGDITDVQEIKQGVYAQGHAQLVAKNLKLLIEGGGKERKLGTYKAQPPISIVSLGRKHGVAQFPFMTIIGRFPGMIKSGDLFVGKTRKELGLEPNVKKS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1201 360 Gene3D - 1 344 - -
Apr3g1201 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 280 IPR023753 GO:0016491
Apr3g1201 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Apr3g1201 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 92 110 - -
Apr3g1201 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Apr3g1201 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 230 - -
Apr3g1201 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Apr3g1201 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Apr3g1201 360 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 360 - -
Apr3g1201 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1201 Apr-Chr3 26564710 26567808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1201 3 272 EF-hand Containing Proteins AT4G05020 25.994 2.48e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1201 K22745 - gmx:100817682 605.134