Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1191 ATGGGGAAGAATCAGGACCAGAAAACGGGGCTAGGAAGGGCCCTTGTGAAGCAGCACAATCAGATGGTTCAGCAGAGCAAAGAGAAGAACCGATTCTACAAGAAGAAGTTTCTCGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCATCGAGCAAACCGTTGATTCTCTCCCCGATCGCTCCGCCGCCACACCTTCCTTACTCATCAACTTAGACCATGCCTCTGTGTCCGATGAAACGACGTCGGAAGTAGCGAAGAAGCAGCGGAAGCAAGAGGAGGCACTATATGCTAGCAGCCTCCGTGTTCCGCGCCGGCCGCCGTGGAATTCCGACATGTCTGCCGAGGAGCTTCATGAGAGTGAAACGCAAGCTTTTTTGATTTGGCGTCGCAGTTTAGCAAGGCTTGAGGAGAATAAGAAGCTTGTTCTTACTCCGTTTGAGAAAAATCTTGACATATGGAGACAGCTCTGGCGGGTTGTTGAGCGGAGTGATTTGCTTGTTATGGTCGTTGATTCCCGAGATCCACTGTTCTATCGTTGTCCAGACCTTGAGACTTATGCACAAGAGGTTGATGAGCATAAACGCACTTTGCTTTTGGTCAATAAGGCTGATCTTTTACCTGCCTCTATCAGAGAGAAATGGGCAGAATATTTCCGTGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTTCAGCAGCCCTGGAAGGCAAAAAGCTTGGTTCATCATGGGACCATGATAATGCAGGTAGAACTAATAGCCCAGACACAAAGATATATGGAAGGGATGAGCTTTTGGCCCGCTTGCAATCAGAGGCAGAAGAGATTGTTGACAGAAGGAGAAATTCAGGCTCCTCTGACACAGGGCCATCTGACTATAAATCTCCTGCTGAAAATGCTGCTTGTAGTTTATCATCAAGTAATGTAGTTGTGGGATTTGTCGGATATCCTAATGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGGACTGGTGTTACCTCTACTCCAGGGAAAACAAAGCATTTTCAGACATTAATTATCTCTGATAAATTGACCCTTTGTGATTGTCCTGGACTAGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTACCTATTGATAGGATGACTGAACACAGGGAATCTGTTCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATAGAGGAGATTTATAAGATCAGGCTTCCTAAACCTAAGCCATATGAGTCCCAATCCCGTCCCCCTCTAGCATCTGAACTTTTGAGAGCGTATTGTGCTTCTCGTGGGTATGTTGCCTCTAGTGGACTCCCTGATGAAACTAGGGCTGCCCGTCAGATATTGAGGGATTACATTGATGGGAAGTTGCCTCACTATGAAATGCCTCCAGGTGTGTCAAATGAGGAACAAGCTTTGGAAGATCCCACTGGACATGTTTCAGTTGACTTGCATGAATCAGATTCATCTGGTATCGAAGATTCTTCGGATGTTGAGAGTGAAATTGCCCCAAATCTTGAGCATGTATTGGATGACCTCAATTCATTCGACATGGCTAATGGACTTGCTCCAACGAAAGTTACTATGAAGAAGTCTAAGGCATCTCATAAGCACCATAAAAAGCCCCAGAGAAAAAAAGATCGATCTTGGAGAGCAGGCAATGATGATGCCGATGGGATGCCAGTGGCAAGATTCTTTCAGAAACCAGCAAATATGGGTCCTCTGAAGGTTGGATAA 1773 0.4563 MGKNQDQKTGLGRALVKQHNQMVQQSKEKNRFYKKKFLESFTEVSDIDAVIEQTVDSLPDRSAATPSLLINLDHASVSDETTSEVAKKQRKQEEALYASSLRVPRRPPWNSDMSAEELHESETQAFLIWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLETYAQEVDEHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAASAALEGKKLGSSWDHDNAGRTNSPDTKIYGRDELLARLQSEAEEIVDRRRNSGSSDTGPSDYKSPAENAACSLSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEHRESVQVVADRVPRHVIEEIYKIRLPKPKPYESQSRPPLASELLRAYCASRGYVASSGLPDETRAARQILRDYIDGKLPHYEMPPGVSNEEQALEDPTGHVSVDLHESDSSGIEDSSDVESEIAPNLEHVLDDLNSFDMANGLAPTKVTMKKSKASHKHHKKPQRKKDRSWRAGNDDADGMPVARFFQKPANMGPLKVG* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1191 590 MobiDBLite consensus disorder prediction 286 300 - -
Apr3g1191 590 MobiDBLite consensus disorder prediction 539 590 - -
Apr3g1191 590 CDD HSR1_MMR1 153 369 - -
Apr3g1191 590 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 154 369 IPR030378 GO:0005525
Apr3g1191 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 444 IPR027417 -
Apr3g1191 590 MobiDBLite consensus disorder prediction 473 511 - -
Apr3g1191 590 Coils Coil 16 36 - -
Apr3g1191 590 PRINTS GTP1/OBG GTP-binding protein family signature 314 334 IPR006073 GO:0005525
Apr3g1191 590 PRINTS GTP1/OBG GTP-binding protein family signature 360 375 IPR006073 GO:0005525
Apr3g1191 590 MobiDBLite consensus disorder prediction 542 559 - -
Apr3g1191 590 Gene3D - 373 475 IPR023179 -
Apr3g1191 590 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 557 IPR043358 GO:0003924
Apr3g1191 590 PANTHER GTPASE LSG1-1 1 557 - -
Apr3g1191 590 MobiDBLite consensus disorder prediction 279 300 - -
Apr3g1191 590 Pfam 50S ribosome-binding GTPase 314 370 IPR006073 GO:0005525
Apr3g1191 590 Gene3D - 153 370 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1191 Apr-Chr3 26397738 26401779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1191 K14539 - gmx:100817523 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1191 3 26397738 26401779 Apr3g1191 3 26397738 26401779 ECH