Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1184 ATGGCTGTGGGTAGAGGCCTCGCTGTCGTGCTGCTCTTACTGGCGGTGTACTGTGGGCTGGACCCATTCAAACACAGCCCAATAGCGAACTTCCCTGACTTCGACGCCAAAAAGATTGACATGCCGACATGGTCCGAGGTTCCTACCCAGCAAGACAAACACAACTTGTTGCAAAAATCTGAGATAAAGTTTTTGAATGAGGTGCAGGGTCCAGAGAGCATTGCCTTTGACCCTCTTGGTCGTGGCCCTTATACCGGTCTCGCCGATGGCAGAATCGTTTTCTGGAATGGTCACTCTTGGGTTGACTTTGCTTATACCTCCCCCAACAGGTCAGAACTGTGTAATCCTATAGCATCTGCGACACCTTTCAGTTTTGTGAAAACTGAGCATATATGTGGAAGGCCTTTGGGACTTAGATTTCACAAGAAAACAGGTGATTTGTACATTGCAGATGCATATTTTGGGCTCTTGAAGGTGGGCCCTGAGGGTGGTTTAGCAACCTCTCTTGTAACTGAGGCTGAAGGGGTGCCTTTGAGGTTTACTAATGATGTTGATGTTGATGAGGAAGGGAATGTTTATTTCACGGAGAGCAGTTGTATTTATCCGAGGAGGAATTTCATTCAGCTGGTATTTTCTGGGGACGACAGTGGCAAGGTTTTGAAATACAACCCTACCACTAAGGAAACCACTGTTCTTGCAAGGAACATTCAATTCCCAAATGGCATTTCCTTAAGCAAGGATGGTTCCTTCTTTGTCTTCTGTGAAGGGGTTGTTGGCAGGTTACGTAAATACTGGCTGAAAGGAGATAAAGCTGGGACTTCAGAGATCTTAGCCATTCTACCTGGATATCCAGACAATGTGAGAGTGAATGAAGATGGTGATTTTTGGGTGGCTATTCATTGTAGAAGGTATATGTATGCGTATCTTAATGGTCTCTACCCAAAGATAAGGAAAGCCATACTCAAGCTTCCTATACCAACAAAGATTCAATATCTGCTTCAAATAGGAGGTCACCCACATGCTGTAGTAGTTAAGTATAGCCCTGAAGGTAAACTTGTGCAGATATTGGAGGACAGTGAGGGGAAAGTTGTTAAAGCAGTGAGTGAAGTGGAGGAGAAGGATGGGAAACTCTGGATGGGAAGTGTTCTCATGCCTTTTGTTGCAGTATACAACTTGACATAA 1182 0.4484 MAVGRGLAVVLLLLAVYCGLDPFKHSPIANFPDFDAKKIDMPTWSEVPTQQDKHNLLQKSEIKFLNEVQGPESIAFDPLGRGPYTGLADGRIVFWNGHSWVDFAYTSPNRSELCNPIASATPFSFVKTEHICGRPLGLRFHKKTGDLYIADAYFGLLKVGPEGGLATSLVTEAEGVPLRFTNDVDVDEEGNVYFTESSCIYPRRNFIQLVFSGDDSGKVLKYNPTTKETTVLARNIQFPNGISLSKDGSFFVFCEGVVGRLRKYWLKGDKAGTSEILAILPGYPDNVRVNEDGDFWVAIHCRRYMYAYLNGLYPKIRKAILKLPIPTKIQYLLQIGGHPHAVVVKYSPEGKLVQILEDSEGKVVKAVSEVEEKDGKLWMGSVLMPFVAVYNLT* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1184 393 Gene3D - 54 393 IPR011042 -
Apr3g1184 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 392 - -
Apr3g1184 393 Pfam Strictosidine synthase-like, N-terminal 59 94 - -
Apr3g1184 393 Pfam Strictosidine synthase 182 268 IPR018119 GO:0009058|GO:0016844
Apr3g1184 393 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 7 392 - -
Apr3g1184 393 SUPERFAMILY Calcium-dependent phosphotriesterase 54 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1184 Apr-Chr3 26339594 26342463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1184 - - gmx:100803331 705.671