Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1178 ATGGCCGAAACCCTAAGCCCCAATCCCACGCTGGGTCAGAAGCAGAGGCTCCGCATCCAATCTCCAACCAGCCCCTTCTTCTTGGGTTCCAACGACGACCAGCTCGAACGTGCCCAGGCACGCGCCGCTCGTGCCGCCGCTATCCGCCGCAAGAGCCTCGCCCTCTCCCAACCTCTTCACTCCAATTCCGATCCCTGCCTAAACAAACGCCAGATCCTTGATTTGTTCCAAAACTGCATTAAGCTCGCCAGCGAAAACAAAATTAATCAGAAAAACACGTGGGAGTTGAACTTGATTGATCACCTCACTGATATTATTAAGGTCGAGGAAGAAGATGATGCAGAGACTAATTTTCAAAAGGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTACATTCCGAGGCATATAAAGTTCTCGGTGGGATGAATAGAGCAGGCCAAGAAGCTGATGAGCAAGGTTATAACACTAATCAGGAGGGTGCTAATATTGAGAGTGGACATGAAGAAGGCAAGAAAGAGACGAACAAAAAGTTGTCCCCTTTGTCAACACTGGAATCGTCTTTTGAGGTTCTTAATGTAAAGAAGTTTGATGCTGCATTTGTTGTAGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGAGGAGCCAAGGGTCTTTTAATGAATAATCTTGGTGTATATGGTCGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCTGCTAAGTGTATGACAAGCCAAAATCAACCTGATTTTTCAGATACTGTCGATCTTTCTTTTGCCAGAGATTGTATTGAGCAGATGGTATTGGACCTGCGTGTGAAGGATGAAATTTCTCCAACTCTTAGGACTATAGTAAACCAATTTGATGAAAGTAATAGAAGGCCTACTGATTTTCAACTTCATGACCAGAATTCGGCTGCAGATCTTGATCCTGCTTTTAATGGTGAAAAAGGTTTTGACAAAGAAGAATATGAAAACTGCACATCCTGGAGTGATGATCACGACGATCAAACAGTTGTTGCTGATCTAGACTGTAATGATGAAGATCCAAGTTTTCCTAGTTACCCTCAGGAAAATGAGGCATTTCCTTCCCCAGACCGCGATATGGATGACAGATTTGAAAATGTTGACGGCTATTTATTTTTGAGTCTGGGTTTTAGTTCAAAACAAAACGCATGGGCAGGTCCCGATCATTGGAAGTATCGAAGATCCAAAGTCTCAGAGGTTCATCCTATATCTGAAGATGGGTCGACTGTGAAAACTAGGCAGCCAAGGAGTAAGAAACAGGCCGAAGTTGATTTAAATTTCACAAATTCTCTTGAGGAGAAAATGCTAGATATATTTTCTCTTCCCAAGAATCCCAAATCGTTACTGCTTCCTGAAAGCAGATTGCCTTGCAATACAAAACTTCCAGAGGACTGCCATTATGAGCCAGAGGATCTTGTCAAGTTATTTCTTCTCCCTAATGTGAAGTGTCTTGGGAGGAGGACAAAAAGGTTCTCAGGTAAATATGGATCTAGAGATCAATACAATGAGTGTGAATCGTTCCCTTCGTGGGATAATGGAAGTGTTTGTGGGGACGACTCTGGTGACTATGAAGGTGATCTTCATAGTGACATGGAGGACTCCAACACTCTTATTACTCAGCCTCGTCAGGTCAATAAAATTGAAGTCCAGTATGACAAGACTTCCAAACAAGTTGATGTTCAGGCACTTAAAATTACACTTTGGGACCACGTTCAAGAATCTGTTAAACTTCCTTTTCAGGGTCAAAAAGACACCGTATCTTTCAGGAGTATATTGGCCGACTTTCCTAGCGAATGCAATGCTGCTGCAAACATTAGTGACATCTCTCCTCATCTGTGCTTCATATGTCTATTGCATTTGGCAAACGAGAAAGGTCTGAGCATTCAAAGCTTCCCCAACTTGGATGATCTTGCCGTACGCCTTCCACATGTTGGAGACTCTCTGAAAGGAACAGTTTAG 2019 0.4314 MAETLSPNPTLGQKQRLRIQSPTSPFFLGSNDDQLERAQARAARAAAIRRKSLALSQPLHSNSDPCLNKRQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKVEEEDDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEADEQGYNTNQEGANIESGHEEGKKETNKKLSPLSTLESSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGRCRVLFDSLEVPAKCMTSQNQPDFSDTVDLSFARDCIEQMVLDLRVKDEISPTLRTIVNQFDESNRRPTDFQLHDQNSAADLDPAFNGEKGFDKEEYENCTSWSDDHDDQTVVADLDCNDEDPSFPSYPQENEAFPSPDRDMDDRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRRSKVSEVHPISEDGSTVKTRQPRSKKQAEVDLNFTNSLEEKMLDIFSLPKNPKSLLLPESRLPCNTKLPEDCHYEPEDLVKLFLLPNVKCLGRRTKRFSGKYGSRDQYNECESFPSWDNGSVCGDDSGDYEGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVQALKITLWDHVQESVKLPFQGQKDTVSFRSILADFPSECNAAANISDISPHLCFICLLHLANEKGLSIQSFPNLDDLAVRLPHVGDSLKGTV* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1178 672 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 665 IPR022816 GO:0000796|GO:0007076
Apr3g1178 672 MobiDBLite consensus disorder prediction 157 171 - -
Apr3g1178 672 PIRSF Condensin_H 1 274 IPR022816 GO:0000796|GO:0007076
Apr3g1178 672 PIRSF Condensin_H 255 551 IPR022816 GO:0000796|GO:0007076
Apr3g1178 672 PIRSF Condensin_H 540 663 IPR022816 GO:0000796|GO:0007076
Apr3g1178 672 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 665 - -
Apr3g1178 672 MobiDBLite consensus disorder prediction 172 186 - -
Apr3g1178 672 MobiDBLite consensus disorder prediction 156 186 - -
Apr3g1178 672 Pfam Condensin complex subunit 2 548 660 IPR022816 GO:0000796|GO:0007076
Apr3g1178 672 Pfam Condensin complex subunit 2 24 542 IPR022816 GO:0000796|GO:0007076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1178 K06676 - gmx:100799781 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1178 3 26299334 26303017 Apr3g1178 3 26299334 26303017 ECH