Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1172 ATGGATGAAAATGAGGAACAGCATCCACAACCGGATATAGTACTGCCAATAGATGTTATTGAATCAAATTGCTTGTCTCAAAGATCTTCTTTGTCCTCTATTCTAACACAATTCCATGCAGGGTACTTCAGGATTGGTTTATCTCTCTCTAGCCAAGCCTTTTTATGGAAGATCCTTATTGAGCCAATCCAAGATGCACATGCTCTTAGACGCATGTTTTCAACCATACCCTTTTCTGCCTTATTTCTCTTATGGTCACTGGCCTTCTTCACACTAGTCATACTCTCTTTTCTATACGTTCTCAAATGTATGTTTCATTTTCATATGGTTAAGGGTGAGTTCTTAAACCAAGTAGGGGTAAATTACTTTTTTGTCCCCTGGATTTCATGGCTACTTTTGCTAGAATCATCACCATTCCTCAGCCCAACCACACTATATTACAAAATACTTTGGTGGGTGTTTGTTGTTCCTGTGTTGATGCTTGATGTGAAGATTTATGGTCAATGGTTTACAAAAGGGAAGAGGTTTCTATCAACAGTGGCAAATCCAACAAGCCAATTGTCTGTGATTGGAAACTTGGTGGGTGCACAAGCTGCTGCACAAATGGGTTGGAAAGAGAGTGCACTATGCATGTTTTCTTTGGGTATTTCACATTACTTAGTACTTTTTGTGACACTCTATCAGAGATTGCCAGGGAACAATAGCCTCCCTTCAATGCTACAACCAGTGTTCTTCTTGTTCTTTGCAGCACCAAGCATGGCAAGCTTGGCTTGGGACTCCATTTGTGGCAAGTTTGACACCACATGCAAGATACTGTTCTTCCTCTCCCTCTTCCTTTTCATGTCCCTGGTTTCAAGGCCCCTGCTATTTAAGAAGTCGATGAGGAAGTTCAATGTGGCATGGTGGGCTTATTCTTTTCCTCTCACGGCTTTGGCATTGGCCTCAGCAGAGTATGCACAAGAAGTTAAAGGAGTTGTGGCTCATGCCATTATGTTTGTCTTATCATCAATCTCAGCTTTGGTGTCTTTAATCTTAATAGTTATCACTGCTTTCAACATTATGCGTGCCCTTGCTTCCTCGCAACAAAAGCATTGTATGACAATGTGA 1107 0.4119 MDENEEQHPQPDIVLPIDVIESNCLSQRSSLSSILTQFHAGYFRIGLSLSSQAFLWKILIEPIQDAHALRRMFSTIPFSALFLLWSLAFFTLVILSFLYVLKCMFHFHMVKGEFLNQVGVNYFFVPWISWLLLLESSPFLSPTTLYYKILWWVFVVPVLMLDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQAAAQMGWKESALCMFSLGISHYLVLFVTLYQRLPGNNSLPSMLQPVFFLFFAAPSMASLAWDSICGKFDTTCKILFFLSLFLFMSLVSRPLLFKKSMRKFNVAWWAYSFPLTALALASAEYAQEVKGVVAHAIMFVLSSISALVSLILIVITAFNIMRALASSQQKHCMTM* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1172 368 Gene3D - 32 360 IPR038665 -
Apr3g1172 368 PANTHER - 24 362 IPR030183 GO:0006873|GO:0008308|GO:0016021
Apr3g1172 368 CDD TDT_SLAC1_like 38 349 - -
Apr3g1172 368 PANTHER OS11G0274300 PROTEIN 24 362 - -
Apr3g1172 368 Pfam Voltage-dependent anion channel 37 349 IPR004695 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1172 Apr-Chr3 26250632 26252401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1172 - - gmx:100794114 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1172 3 26250632 26252401 Apr3g1172 3 26250632 26252401 ECH