Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1166 ATGGGTTGCTCCACTAGATTGTGTTGTCTCTTATTGTTGCTTGTGGCATGTGCTAGTGGAGAGGACCCTTATAGGTTCTACACTTGGAATGTTACATATGGAGACATTTTTCCACTTGGTGTTAAACAACAGGGGATTTTGATAAATGGGCAATTTCCAGGGCCTCAGATCGAGTCCGTGACCAATGATAACTTGATTATCAATGTTTTCAACAGTTTGAATGAACCTTTTCTCATATCTTGGAATGGAGTGCTGCAGAGGAGGAATTCATGGCAGGATGGAGTGTATGGTACCAATTGTCCAATCCAACCAGGGCAGAACTTCACTTTTGTTCTTCAAGTAAAAGATCAGATAGGTAGCTACTTCTACTATCCTTCCCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGTTTCAAAATTTCTAGTCGCCCCGGCATTCCTGTACCTTTTCCTCCTCCATCAGGAGATTTCACCATATTGGCTGGAGACTGGTACAAGAGAAATCACACAGATTTGAGGGCCATTTTAGATGGTGGAAGTGACCTTCCCTTCCCTGATGGACTTATCATCAATGGTCATGGTTCCAATGCCTACACATTCACTGTTGATCAAGGAAAGACATACAGATTCCGGATATCCAATGTGGGCCTCACCACTTCCATCAATTTCAGAATCCAAGGGCATAAAATGACAATTGTTGAGGTGGAAGGAACCCACACACTCCAAAACACTTACGACTCACTTGACATTCATCTGGGCCAGACTTATTCTGTATTGGTTACTGCTGATCAACCCCCCCAAGACTACTACATGGTTGTCACAACACGATTCACCACCCAAGTGTTGAATGCTACCTCCATTCTTCGTTATAGTAACTCTGCAAGAAGTGTTTCTGGCCCTTTCCCTGGAGGGCCAACTATTCAAATTGATTGGTCTATTAACCAAGCTCGCTCTCTTAGGAGGAACCTGACAGCAAGTGGGCCAAGACCTAATCCACAAGGGTCTTACCATTATGGTCTAATAAACACAACACGTACAATTAGACTTCAAAATTCTGCTCCAGTTATCACTGGGAAACAAAGATATGCTATCAATAGTGTGTCCTTTATCCCTGCTGATACACCACTTAAACTTGCTGATTACTTCAAGATCCAAGGGGTGTTCTCCCTTGGAAGTATCTCTGACAATCCCACTGGTGGTGGTGGTTACCTTCAGACTTCTGTAATGGAAGCTGATTTTCGAGGCTATGTGGAGATTGTGTTTGAGAATCCTGAAGATACTGTGCAATCATGGCACATTGATGGCCACAGCTTCTTTGTAGTAGGAATGGATGGAGGACAATGGTCAGCTGCAAGCAGGCTAAGTTACAATTTAAGAGATACAATTTCTCGTTGCACAGTTCAGGTGTATCCCAAGTCATGGACTGCACTTTACATGCCTTTGGACAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGCTCGTCAGTATTTGGGCCAACAATTTTATATAAGAGTGTATTCTCCAGCAAATTCATGGAGAGATGAGTACCCAATTCCAAGTAATGCTCTACTGTGTGGCAAGGCAATTGGCCACCACACTCGTTCTTTATGA 1620 0.4352 MGCSTRLCCLLLLLVACASGEDPYRFYTWNVTYGDIFPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLNEPFLISWNGVLQRRNSWQDGVYGTNCPIQPGQNFTFVLQVKDQIGSYFYYPSLAFHKAAGGYGGFKISSRPGIPVPFPPPSGDFTILAGDWYKRNHTDLRAILDGGSDLPFPDGLIINGHGSNAYTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMTIVEVEGTHTLQNTYDSLDIHLGQTYSVLVTADQPPQDYYMVVTTRFTTQVLNATSILRYSNSARSVSGPFPGGPTIQIDWSINQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLQNSAPVITGKQRYAINSVSFIPADTPLKLADYFKIQGVFSLGSISDNPTGGGGYLQTSVMEADFRGYVEIVFENPEDTVQSWHIDGHSFFVVGMDGGQWSAASRLSYNLRDTISRCTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGQQFYIRVYSPANSWRDEYPIPSNALLCGKAIGHHTRSL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1166 539 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Apr3g1166 539 Gene3D - 155 301 IPR008972 -
Apr3g1166 539 Gene3D - 340 535 IPR008972 -
Apr3g1166 539 PANTHER L-ASCORBATE OXIDASE HOMOLOG 7 532 - -
Apr3g1166 539 SUPERFAMILY Cupredoxins 21 171 IPR008972 -
Apr3g1166 539 Pfam Multicopper oxidase 157 293 IPR001117 -
Apr3g1166 539 SUPERFAMILY Cupredoxins 151 331 IPR008972 -
Apr3g1166 539 PANTHER MULTI-COPPER OXIDASE 7 532 IPR045087 -
Apr3g1166 539 SUPERFAMILY Cupredoxins 341 532 IPR008972 -
Apr3g1166 539 Pfam Multicopper oxidase 375 510 IPR011706 GO:0005507|GO:0016491
Apr3g1166 539 CDD CuRO_3_AAO_like_1 372 494 IPR034275 GO:0005507
Apr3g1166 539 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Apr3g1166 539 CDD CuRO_1_AAO_like_1 26 141 IPR034273 GO:0005507
Apr3g1166 539 Gene3D - 24 145 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1166 Apr-Chr3 26205433 26209311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1166 - - gmx:100775285 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1166 3 26205433 26209311 Apr3g1166 3 26205433 26209311 ECH