Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1158 ATGGCAGAACCCAAAGTTAAATACGATCGCCAGCTCAGAATATGGGGTGAACAAGGACAGGCAGCTCTTGAGAAGTCTAGTATTTGCTTACTTAACTGTGGTCCTACTGGTTCTGAAACACTTAAGAATCTAGTTCTTGGTGGGGTTGGAAGCATCACTGTCGTTGATGGATCTAAAGTTGAAGTGGGTGACCTTGGAAACAATTTTTTGGTGGATGAGTCGAGCCTTGGGCAGTCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAATGATGCAGTTAAAGCAAAATTTGTAGAAGAGTATCCTGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTGTTGCTACTCAGCTCGTGGAAAACTCAATGATAAAGCTTGATAGAATCTGCAGGGAGGCAAATGTTATGTTGATTTTTGCTCGCTCCTATGGGCTTACAGGGTTTGTTCGAATTAGTTTGAAGGAACATACTGTGATTGAGTCAAAGCCTGAGCATTTTTTGGATGATCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGGTTTGCAGATGGTGTTGACTTGAATGTGCAAGATCCTGTGGCCCATAAGCACATACCATATGTTGTTATTCTTGTCAAGATGGCCGATGAGTGGGCTAAAAGCCATGGCGGTAGGCTTCCATCAACCAGAGAAGAAAAAAGGGAGTTCAAGGAGCTTCTTAAGGCTCGGATGGTTGCTCAAGATGAGGATAATTATAAAGAAGCCATTGAGTCATCATTCAAAGTATTTGCTCCCCGAGGAATTAGTTCAGAGTTGCAACAGATACTAAATGATAGTTCTGCTGAAGTGGACTCTAGTTCATCAGATTTTTGGGTGTTGGTGGCAGCTTTAAAGGATTTCATTACAAATGAAGGTGCAGGTGAGGTACCCCTTGAAGGATCTATACCAGATATGACTTCTTCTACCGAGCAATATGTGAATTTGCAGAATATCTATCAGGCTAAGGCTGAGGCTGACTTTCTTGTAATAGAACGTCTGGTGAGAAGTAATTTGAAGAAAATTGGTAGAGATTCAAATAGCATTCCAAGGTCAACAATTAAAAGCTTCTGTAAGAATGCAAGAAAACTCAAAGTTTGTAGGTACCGTCTAGTTGAAGATGAGTTTAATTCTCCAAACCTACCCGAGTTGCAGAAGTATCTGACTGATGAGGATTATAGCGTTGCTGTGGGAATTTATATTTTGCTCCGAGCCGTTGATCGGTTTGCTGCCAATTACAATAGTTTTCCTGGACAGTTTGACAGTGCAATGGATGAGGATATACCCCGATTGAAGAGCACAGCAATTGGCCTACTTAGCGACCTGGGATGCAATGGTGCTACCTTAGCTGAGGACCTTATCAACGAGATGTGTCGATTTGGTGCTGCTGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCGTCCCAAGAAGTAATCAAGCTCATAACAAGACAATTTGTACCAATGTCGGGAACGTACATATTCAACGGCATTGACCACAAGTCACAGCTATTGTCACTGTAA 1572 0.4173 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEVGDLGNNFLVDESSLGQSKAKCVCSFLQELNDAVKAKFVEEYPETLIETNPSFFSQFTLVVATQLVENSMIKLDRICREANVMLIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWPELKRFADGVDLNVQDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKREFKELLKARMVAQDEDNYKEAIESSFKVFAPRGISSELQQILNDSSAEVDSSSSDFWVLVAALKDFITNEGAGEVPLEGSIPDMTSSTEQYVNLQNIYQAKAEADFLVIERLVRSNLKKIGRDSNSIPRSTIKSFCKNARKLKVCRYRLVEDEFNSPNLPELQKYLTDEDYSVAVGIYILLRAVDRFAANYNSFPGQFDSAMDEDIPRLKSTAIGLLSDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLLSL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1158 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 523 - -
Apr3g1158 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 523 IPR045886 -
Apr3g1158 523 Gene3D - 2 278 - -
Apr3g1158 523 Gene3D - 356 523 - -
Apr3g1158 523 Pfam ThiF family 8 501 IPR000594 -
Apr3g1158 523 CDD APPBP1_RUB 7 521 - -
Apr3g1158 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Apr3g1158 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1158 7 78 EF-hand Containing Proteins AT2G30110 35.065 9.88e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1158 K04532 - gmx:100793799 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1158 3 26133518 26140516 Apr3g1158 3 26133518 26140516 ECH