Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1157 ATGTATATAACTGCCTCTCCGCTTCTCAGAGTAACTAGGCCTAAACTATTCTTTTCTTCTTCTGTTTCTAGAACCTTCGCTTATCCTCCTTCTGTAACCGCTTACTCCTCCCGCAGTTCCTTCTCCTTCGGGACTCTATCCTTTCGCTCCTCCGTTCCCCGGTGGAGCCACCGTCTCCATTCTACCTCTCCGCTCACTGTTCGTCCTCAGATCAGAGCCGTTGCCCCCGCCGTCCAACGCTTCCACCGCAAAATCGCTACCATGGCCAATGAAAATCCTTTTAATGGAAACTTGACAAGTCTCCCCAAGCCCGGTGGTGGCGAGTTTGGAAAATTCTATAGTCTTCCTTCTCTCAACGATCCCAGAATTGACAGGTTACCGTATTCCATTAGAATTCTTCTTGAATCTGCCATTCGTAATTGTGACAATTTTCAAGTAACTAAAGAAGATGTTGAGAAAATTCTTGACTGGGAAAAAACTTCTACAAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTTCTCTTGCAGGATTTTACTGGAGTCCCCGCTGTTGTTGACCTGGCTTGCATGCGGGATGCTATGAATAAGCTTGGCAGTGATTCAAATAAGATCAACCCCCTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAAGTTGATGTAGCAAGATCAGAAAATGCTGTGCAGTCAAATATGGAGCTTGAATTCCGGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGGTCAACTGCATTCCGTAACATGCTTGTTGTTCCTCCTGGTTCTGGTATAGTCCATCAAGTGAATCTTGAATATCTTGGACGGGTAGTTTTCAACAATGAGGGCCTACTCTATCCTGACAGTGTGGTTGGGACTGATTCACACACAACTATGATAGATGGGCTTGGTGTTGCTGGATGGGGAGTTGGAGGTATTGAAGCTGAGGCAGCAATGCTTGGTCAGCCTATGAGCATGGTTTTGCCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAACTACGCAATGGTGTTACAGCAACAGACTTGGTTCTAACTGTGACACAAATTCTAAGAAAGCACGGTGTTGTGGGGAAATTTGTTGAATTTCACGGTGATGGTATGGGTGAATTATCTTTGGCTGACAGGGCAACTATTGCTAATATGTCTCCTGAATATGGTGCCACAATGGGCTTCTTCCCTGTGGATCATGTTACATTACAATATCTCAAGTTAACGGGAAGAAGTGATGAGACTGTGGCCATGATAGAGTCTTATCTCAGGGCAAACAAACTGTTCGTTGACTATAATGAGCCACAACAAGACAGAGTGTATTCATCATATCTTGAATTAAACCTTTCCGATGTTGAACCATGTATCTCAGGACCAAAGAGACCTCATGACCGGGTGCCTTTGAAAGAAATGAAGACTGACTGGCAGGCTTGTCTTGATAGCAAAGTTGGGTTTAAGGGATTTGCTATACCAAAAGAGGCACAAGGAAAAGTTGCAAAATTTGATTTCCACGGGCAGCCGGCAGAGCTCAAGCATGGTAGTGTTGTAATTGCTGCAATCACGAGCTGTACAAATACGTCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTTGCAAAAAAAGCTCACGAGCTTGGTTTACAGGTCAAGCCCTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGTGTTGTTACAAAATATCTACTCCAGAGTGGACTGCAAAAATATCTAAATGAACAAGGTTTTCATATTGTTGGATTTGGCTGTACAACTTGTATTGGCAATTCTGGAGAGCTGGATGAATCCGTTGCTTCTGCCATCTCAGAAAATGACATTATAGCAGCTGCTGTATTGTCTGGGAACCGTAATTTTGAGGGCCGTGTACATCCATTGACAAGAGCTAACTACCTTGCCTCTCCTCCTCTAGTTGTTGCTTATGCTCTTGCTGGCACGGTTGACATTGACTTTGAAAAGGAGCCAATTGGGACAGGGAAGGACGGCAAGAATGTCTACTTGAGGGATATATGGCCATCTACTGAAGAGATTGCAGAGGCTGTCCAATCTAATGTCTTGCCAGACATGTTCCTAAGTACATATGAGGCTATTACCAAGGGAAACCCTATGTGGAATCAACTACAAGTTCCTGCTGACACTCTCTACTCATGGGACCCCAACTCAACATATATCCATGAGCCCCCATACTTCAAGGATATGACCATGGATCCTCCTGGATCTCATGGTGTAAAAGATGCCTATTGCCTGCTGAATTTTGGTGACAGTATAACCACTGATCATATTTCTCCAGCTGGAAGTATTCACAAGGACAGTCCTGCTGCTAAATACCTTCTTGAGCGCGGGGTGGAACGCAAGGACTTCAATTCTTATGGAAGTCGTCGCGGCAATGATGAGGTGATGGCAAGGGGAACTTTTGCCAACATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGGCCGAAGACAATTCACATTCCTACAGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGAGATACAAGGCTTCTGGGCAAGACACCGTTGTGTTGGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCGATGCTACTGGGAGTCAAAGCTGTGATCGCTAAAAGTTTCGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCTCTTTGCTTCAAACCCGGCGAGGATGCGGACACATTGGGATTGACTGGTCATGAACGTTACACAATTGACCTCCCAAGTAAAATTAGTGAGATTAGGCCTGGCCAAGATGTGACGGTCACAACTGATAATGGAAAATCTTTCACCTGCACAGTACGCTTTGACACCGAGGTGGAACTCGCTTACTTCAACCATGGAGGCATACTTCCATATGTCATAAGGAACCTCATTAAGCAGTGA 2958 0.4493 MYITASPLLRVTRPKLFFSSSVSRTFAYPPSVTAYSSRSSFSFGTLSFRSSVPRWSHRLHSTSPLTVRPQIRAVAPAVQRFHRKIATMANENPFNGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVTKEDVEKILDWEKTSTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQSNMELEFRRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRANKLFVDYNEPQQDRVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKTDWQACLDSKVGFKGFAIPKEAQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGFGCTTCIGNSGELDESVASAISENDIIAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVYLRDIWPSTEEIAEAVQSNVLPDMFLSTYEAITKGNPMWNQLQVPADTLYSWDPNSTYIHEPPYFKDMTMDPPGSHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLYVFDAAMRYKASGQDTVVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDADTLGLTGHERYTIDLPSKISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFNHGGILPYVIRNLIKQ* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1157 985 PRINTS Aconitase family signature 234 247 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 258 266 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 287 300 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 301 316 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 363 376 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 377 390 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 459 473 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 524 535 IPR001030 -
Apr3g1157 985 PRINTS Aconitase family signature 586 599 IPR001030 -
Apr3g1157 985 Pfam Aconitase family (aconitate hydratase) 152 655 IPR001030 -
Apr3g1157 985 CDD AcnA_IRP 173 657 - -
Apr3g1157 985 Pfam Aconitase C-terminal domain 784 911 IPR000573 -
Apr3g1157 985 CDD AcnA_IRP_Swivel 761 931 IPR044137 -
Apr3g1157 985 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 57 985 IPR006249 -
Apr3g1157 985 TIGRFAM aconitase_1: aconitate hydratase 1 110 983 IPR006249 -
Apr3g1157 985 ProSitePatterns Aconitase family signature 1. 520 536 IPR018136 -
Apr3g1157 985 Gene3D Aconitase, domain 4 748 984 IPR015928 -
Apr3g1157 985 Gene3D Aconitase, domain 3 91 459 IPR015931 -
Apr3g1157 985 Gene3D - 684 745 - -
Apr3g1157 985 Gene3D Aconitase, domain 3 460 683 IPR015931 -
Apr3g1157 985 PANTHER ACONITATE HYDRATASE 57 985 - -
Apr3g1157 985 ProSitePatterns Aconitase family signature 2. 586 599 IPR018136 -
Apr3g1157 985 SUPERFAMILY LeuD/IlvD-like 724 983 - -
Apr3g1157 985 SUPERFAMILY Aconitase iron-sulfur domain 106 720 IPR036008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1157 Apr-Chr3 26116024 26130918 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1157 K01681 - gmx:100793264 1826.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1157 3 26116024 26130918 Apr3g1157 3 26116024 26130918 ECH
Apr3g1157 3 26116024 26130918 Apr2g2017 2 25496767 25505414 PCT