Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1151 ATGTCCCAGAATGTTGCCCGCTCCCCCACCCTCCGGCGACGTTTTCACCACCGTGTTTCGGTGCTCCGGCGATGCATCCTCCGCGTTCTCCACCGTTTCCTACTCTGCTCCGGTAGGAAGATCACCAATGCCACGTACAGCTTGCTGCCTCCGGATGCAACATTACCCTCTCCGCCGGCTCCGGTGGCTTCCGACGCCGAGCCTGGCCGTGAAGAGGTGCAGGCTACGTCGCTACCTGGGTTTCACACACACGAATTGGACTCTGATTTGGTTTCCTTGAAGATCAGCTTGTTGGGTGATTGCCAAATTGGAAAAACAAGCTTTTTGGTGAAATATGTTGGGGATGAAAAAGAGAAGCAAGGGGAACAGAGGAAAGGGCTAAATCAGATGGACAAAACATTGGTTGTAAGGGGGGCACGTATATCGTATTGTATCTGGGAAGTACAAGGTGATAGAAAGTCAGAAGAACAAATTCCAATGGCTTGTACGGACTCGGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTTTTGGGATGGTACAAAGAAGCCAGGAAATGGAATCAGACGGCAATTCCAGTGTTGATAGGAACCAAGTTTGATGATTTCATTCAGCTCCCTATTGATTTGCAATGGACCATCGCCAGTCAGGCAAGAACATATGCAAAGGCCCTGAATGCCACATTGTTCTTTTCCAGTGCAACCTACAACATCAACGTGAACAAGATCTTCAAGTTCATCACAGCAAAACTCTTTGACCTACCATGGACAGTGGAAAGAAATCTAACTGTTGGGGAGCCCATCATTGACTTCTAA 834 0.4772 MSQNVARSPTLRRRFHHRVSVLRRCILRVLHRFLLCSGRKITNATYSLLPPDATLPSPPAPVASDAEPGREEVQATSLPGFHTHELDSDLVSLKISLLGDCQIGKTSFLVKYVGDEKEKQGEQRKGLNQMDKTLVVRGARISYCIWEVQGDRKSEEQIPMACTDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASQARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1151 277 Gene3D - 84 267 IPR027417 -
Apr3g1151 277 PRINTS Transforming protein P21 ras signature 93 114 - -
Apr3g1151 277 PRINTS Transforming protein P21 ras signature 134 156 - -
Apr3g1151 277 PRINTS Transforming protein P21 ras signature 195 208 - -
Apr3g1151 277 PRINTS Transforming protein P21 ras signature 235 257 - -
Apr3g1151 277 CDD Spg1 93 274 IPR017231 -
Apr3g1151 277 SMART rab_sub_5 93 260 - -
Apr3g1151 277 Pfam Ras family 94 257 IPR001806 GO:0003924|GO:0005525
Apr3g1151 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 268 IPR027417 -
Apr3g1151 277 PANTHER MONOMERIC G-PROTEIN 53 276 - -
Apr3g1151 277 SMART rho_sub_3 95 259 IPR001806 GO:0003924|GO:0005525
Apr3g1151 277 ProSiteProfiles small GTPase Rab1 family profile. 87 277 - -
Apr3g1151 277 PANTHER - 53 276 - -
Apr3g1151 277 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1151 Apr-Chr3 26066700 26070265 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1151 K07976 - gmx:100780638 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1151 3 26066700 26070265 Apr3g1151 3 26066700 26070265 ECH