Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1140 ATGACTCACCTGGTCACTCACACCCAACTCGCCCGAGTCACACCGTTCATTCATCGCTTCAAGCCTTTACTCGGAACCCCAATCTATCGTTCCCAAACCCTTTTTTTCGCCCAATTCTCAACCAAAACTGCCACCATCCGCCGCCGAACTCACCCTCTTCTCCGGCCGGCGATGGACGCGCAACCGGCGGAATCCGGCACGCCCGCCGTCACGGGCGAAGACTTTGTCCACATCGCGGATCTGAAAATGGAGAGCTTGTCCGAGAGTATGGTTCGAATCGACGTGACTTCCGATGCCGACGCCGCTTCGTCCGGTCCTGAAGCGCCGGCGGATTTTGATCGCCGTCCGGCGATGCTCCCGGAGGAGCTCTGGAAAAACGTAGTGGTTCTGTCGTGCGAGTCCACAGCCGAGGGCGGTGTTTGCGATGTCTACTTGGTTGGCACCGCTCATGTCTCCGAGGAATCCAGCAGAGAAGTTCAAGCTATAGTGAATTTTCTGAAACCGCAGGTTGTCTTCCTAGAATTGTGCTCGAGTCGTGTGGCAGTGCTTTCCCTTCAAAATCTCAAGGTACCTACTGTGGGAGAAATGGTTGCAATGTTGAAGAAAAAACATAACATGTTTGAAGTACTTTATGGCTGGTTCCTTGCCAAGATTGCTAGTAAGCTTGAGGTCTTTCCTGGCTCTGAGTTTCGTGTGGCGTATGAAGAAGCCATCAAGTATGGTGGCAGAGTGATACTTGGTGATCGCCCTGTACAGATTACATTAAGGAGAACATGGAGTAAGATGCCACTTTGGCATAAAACAAAATTGTTATACTCTCTACTTTTCCAAGCAGTTTTTTTACCCAGCTCAGACGATCTTAATAAGATGCTGAAGGACATGGATGACAGTGACATGCTAACTCTTGTAATTCAAGAAATGAGTAAGGAGTTTCCAACTTTAATGGAGACACTCGTGCATGAACGAGATCAGTACATGTCCTCCACATTATTAAAAGTGGCAAGTGAAAATAGCTCGGTTGTTGCTGTTGTTGGAAAGGGACATCTACAGGGAATAAAGAAGCATTGGAAGCAACCTGTTGTGATGAAGGATCTCATGACAATTCCATCTCCCAAACCAGCTATCTCTGCTATAAGAATCTTTACATCTGTTGGTGTTGCCGTGGCTGGGGTGGCTATAATATCAGGCGTCTATCTTTCATGCAAGAAATGA 1212 0.4818 MTHLVTHTQLARVTPFIHRFKPLLGTPIYRSQTLFFAQFSTKTATIRRRTHPLLRPAMDAQPAESGTPAVTGEDFVHIADLKMESLSESMVRIDVTSDADAASSGPEAPADFDRRPAMLPEELWKNVVVLSCESTAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQVVFLELCSSRVAVLSLQNLKVPTVGEMVAMLKKKHNMFEVLYGWFLAKIASKLEVFPGSEFRVAYEEAIKYGGRVILGDRPVQITLRRTWSKMPLWHKTKLLYSLLFQAVFLPSSDDLNKMLKDMDDSDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASENSSVVAVVGKGHLQGIKKHWKQPVVMKDLMTIPSPKPAISAIRIFTSVGVAVAGVAIISGVYLSCKK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1140 403 PANTHER PHEROMONE SHUTDOWN PROTEIN 51 403 IPR046345 -
Apr3g1140 403 Pfam TraB/PrgY/gumN family 138 358 IPR002816 -
Apr3g1140 403 PANTHER TRAB FAMILY PROTEIN 51 403 - -
Apr3g1140 403 CDD TraB_PrgY-like 143 356 IPR046345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1140 Apr-Chr3 25962588 25967326 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1140 - - gmx:100810061 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1140 3 25962588 25967326 Apr3g1140 3 25962588 25967326 ECH