Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1132 ATGGCGCGGGGAGTCCATGGCGGCCGGAGTTCTGAGGCGCGACTGAGGTGGAAACAGGCGGGTGGTATTGTGTGCGGTTTGATGAATGGTGGTTCAAAGGCAGAGAATGTCATGTTTTTGTGGAACATCATAAGTATGTTAAGATTTAGTTCCACCCTCTGCTGCATGGCAAGCACAAACGTTTCTCAAAGAAAATCAGCCAATTACCAACCAAACCTGTGGAATTACGATTTTTTGCAATCATTGAAGCATGACTATGCGGATGTAAAATATGAGGACATGGCGAGGAAGATGCAAGAGGAAGTTAGGAGCATGATTAGGGATGAAAATGCAGAGATTTGGACAGCACTGGAGCTGATTGAAGATGTGAAACGCTTGGGCCTGAGCTACCATTTTCACAAGGAGATAAGAGAAGCCCTTCATAGGTTTCTCTCTTTGGAAAGATGTAATGGCACAATTATTCATAGAACCCTGCATGAAACTGCTTTAAGCTTCAGGCTCCTTAGAGAATATGGCTATGATGTCTCAGAAGATATATTTAAGAGCTTCAAGGACCACAAGGGTAACTTCAAGGCAAGCCTTAGAAGAGATGTGAAGGGAATGCTAAGTTTGTATGAGGCATCTTTTCTAAGTTATGAAGGAGAACATATTATGGATGAGGCCAAGGCTTTCACTAGCTTCCATCTAAGGAACCTTGACAAATATAGAATCAGTAGTATTGTTTTGGAACAAGTGAAACATGCCTTGGAGCTTCCACTGCATCGTAGAATCCAAAGGCTTGAAGCTCGGTGGTACATTGAGGCATATGATAAAAGAAGGGATGCAAACCAGGTAGTGCTTGAAGCGGCCAAACTGGATTTCAATGTTGTGCAGTCAAAGTTGCAAAGGGATCTTCAAGAAATGTCAGGGTGGTGGAACCGGATGGGACTAGCTCCAAAATTAAGCTTTAGCAGGGACAGGCTAGTGGAGTGTTTCTTTTGGAGCATGGGAATGGCCTTTGAGCCTCAGTTCAGTGATCTTCGTAAAGGTTTAACCAAAGTTACCTCTCTAATAACTACAATTGATGATGTCTATGATGTTTATGGCACCTTGGATGAACTAGAACTTTTCACGGAAGCTGTAGAAAGTTGGGATATTAAAGCTGTTCAAGTCCTGCCAGAGTATATGAAAATATGCTTCCTAGCTCTCTACAACACTGTCAACGGATTGGCTTATGACGCAATTAAAAACCAAGGACATGATATCCTTCCATACCTCACCAAGGCGTGGTCGGTAATGTTGAAAGCATTCCTCCTAGAAGCCAAGTGGTGTCGGGATAAGTATTTGCCAACATTCGACAACTACCTTAACAATGCCTGGGTGTCAGTGTCTGGTGTAGTAATACTGATCCATGCATATTTCTTGTTGAATCCCAACATCACTAAGGAGGCACTTGATTCCCTAGAAAATTACCATGACCTGTTGCGTAGGCCATCCATTATTTTTCGGCTTTGCAACGATTTGGGTACTTCGAAGGCGGAGTTACATAGAGGTGAAGGAGCAAGCTCGATTTTGTTCTGCATGCGTGAAAGTGGAGTTAGTGAGGAGAGTGCTTACATCAATATCCAAGGTTTGCTTGATGAAACTTGGAAGAAGATGAACAAAGATCGAGTCACATATTCTCCATTTCCAAAGTCATTCGTGGAAACTGCAATGAATCTTGCTAGAATTTCTCAATGCACATACCTAAATGGAGATGGGCATGGAGCCCCAGATAGTGCGGCCAACGATCGCATTCGCTCCTTGATAATTGAACCCATTTCACTAAGGGAGAACCATGTATCTTGA 1827 0.4308 MARGVHGGRSSEARLRWKQAGGIVCGLMNGGSKAENVMFLWNIISMLRFSSTLCCMASTNVSQRKSANYQPNLWNYDFLQSLKHDYADVKYEDMARKMQEEVRSMIRDENAEIWTALELIEDVKRLGLSYHFHKEIREALHRFLSLERCNGTIIHRTLHETALSFRLLREYGYDVSEDIFKSFKDHKGNFKASLRRDVKGMLSLYEASFLSYEGEHIMDEAKAFTSFHLRNLDKYRISSIVLEQVKHALELPLHRRIQRLEARWYIEAYDKRRDANQVVLEAAKLDFNVVQSKLQRDLQEMSGWWNRMGLAPKLSFSRDRLVECFFWSMGMAFEPQFSDLRKGLTKVTSLITTIDDVYDVYGTLDELELFTEAVESWDIKAVQVLPEYMKICFLALYNTVNGLAYDAIKNQGHDILPYLTKAWSVMLKAFLLEAKWCRDKYLPTFDNYLNNAWVSVSGVVILIHAYFLLNPNITKEALDSLENYHDLLRRPSIIFRLCNDLGTSKAELHRGEGASSILFCMRESGVSEESAYINIQGLLDETWKKMNKDRVTYSPFPKSFVETAMNLARISQCTYLNGDGHGAPDSAANDRIRSLIIEPISLRENHVS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1132 608 Gene3D - 111 275 IPR036965 GO:0010333|GO:0016829
Apr3g1132 608 Pfam Terpene synthase family, metal binding domain 280 545 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr3g1132 608 PANTHER OS04G0344100 PROTEIN-RELATED 54 601 - -
Apr3g1132 608 Gene3D Farnesyl Diphosphate Synthase 71 589 IPR008949 -
Apr3g1132 608 PANTHER TERPENE SYNTHASE 12-RELATED 54 601 - -
Apr3g1132 608 SFLD Isoprenoid Synthase Type I 276 601 - -
Apr3g1132 608 SUPERFAMILY Terpenoid synthases 276 600 IPR008949 -
Apr3g1132 608 SFLD Terpene Cyclase Like 1 C Terminal Domain 276 601 IPR034741 -
Apr3g1132 608 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 70 274 IPR008930 -
Apr3g1132 608 CDD Terpene_cyclase_plant_C1 64 599 IPR044814 GO:0010333|GO:0016102
Apr3g1132 608 Pfam Terpene synthase, N-terminal domain 74 249 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1132 Apr-Chr3 25888170 25893158 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1132 K12742 K19968 gmx:100814880 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1132 3 25888170 25893158 Apr3g1132 3 25888170 25893158 ECH