Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1130 ATGGAAGCTTGTTGCTGCAATCTTGAAGTGGATGTAAATGGAGAAGAGACCTTCATGGTGGACAAGACAGTTATTACTCAGTACTCAAGCAAATTTGCTAAATTATTTGGAAAATCTAGTAGTGGTTGCACTGGAAAGCTTAAAGTGATATTCCATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAAATTCTGTTATAACAATGGAACAACCAATATAAGTCCCTCCAATTTGTTTCTTGCGCGTAGTGCTGCTGAATACATGGACATGAAGGAACCTGTTGCTGATGTTTCTAACTTATTGGAACAAACAGAAAAGTCACTCCAAGAGATTAGCTATTGGACATGGTCAGAACTTTTAATTGCTTTGAAGCAGTGCCAGAATTTACTGGTGGCAGATTCTTCTGTGATGGTAGAAAGATGCTTGGACTCTGTAGTGGGAAGGCTGGTTTTGGCTAGTGAAGCAAGTCCATGTCCATCTACTTCTTCCACAGATAGTTCTTGGATTCGGTTTTCGTGTGATTCTAAAAGTACTGAGAGTATAAAGACAAATTTCTCTCGTTCAATATGGTGGTTTGAAGATCTCCTATTTTTGAGTCCGTTGTTGGTTGTAATGTTGGTTAAGTCAATGCTTTCGCGTAAGTTGGATCATGTTGTCATTGGCAGGTTTTTGCTCTATTATCAGAAGGCAAAATTTCCCACTTCTACTATGGATGAGAAGAGCAAGATAATAGAAATGGTGATAGATATGCATTATGAAATGGATCAAAGTTCTGTTTCTTGCAAGATTTTATTTGGGATTCTTCGGGTTACTTTGGGTTTGAACATAAGCAAATATAGCAGGAATAAGTTGGAGACTATGATTGGTTCCCAATTGGATCAAGCAACCTTGGACAATTTGCTTGTTCCTTCTCCTTATGGAATAAGCTACTTATATGATGTGAACCTTGTTTTGAGATTTTTGAAAGCATTCCTGCATCAGGGAAATGGTCTAGTCACCCCAATTCAGATGAGAAAAGTTGCTAGCTTAATAGATTTGTATATAGCAGAAATAGCCCCTGATCCTTGTTTGAAAACTTCGAAGTTCTTGGCCCTTGCCACGGCACTCCCAGATTCTGCTAGAGATTCTTATGATGAGCTCTACCATGCAATGGACATGTATCTTGAGGTACATACTCAATTGTCACAAGAAGAAAGGCTGAAGATATGCTGTGGTTTAAATTATGAGAAGCTTTCCCCTCAAACTTGCTCACACCTTTCTCAGAACACAAAATTTCCTTCAAAAACTACAGTTCAAGCTCTCATCTCTAAGCAATCTAAGCTAAAAAATTTACTCCATGTTACTCCTAGCACAACTCCGTGCAATGATTCACCATGCAGCTCCAGTGGTGCTGCTCAAAAGGGAAAGAAAGACAAAATCAATGAACAGGTGGTGTTGTATGCTGACAATTTTGATCTTTCAGCTGATAATGAGAAACTGAGAGCACATTTGCGAGGAATGCAGTGGAGGGTAATGGAATTAGAAAAATTCTGTAGGAAAATGCAAGTACAGATGGCAAAGATTACGAAATCAAAAGGATCAGGCCATAGCTATGCAAAGTCTTTGCCCAAGTTCTGTTCATGA 1632 0.3885 MEACCCNLEVDVNGEETFMVDKTVITQYSSKFAKLFGKSSSGCTGKLKVIFHDFPGGAEGFELMLKFCYNNGTTNISPSNLFLARSAAEYMDMKEPVADVSNLLEQTEKSLQEISYWTWSELLIALKQCQNLLVADSSVMVERCLDSVVGRLVLASEASPCPSTSSTDSSWIRFSCDSKSTESIKTNFSRSIWWFEDLLFLSPLLVVMLVKSMLSRKLDHVVIGRFLLYYQKAKFPTSTMDEKSKIIEMVIDMHYEMDQSSVSCKILFGILRVTLGLNISKYSRNKLETMIGSQLDQATLDNLLVPSPYGISYLYDVNLVLRFLKAFLHQGNGLVTPIQMRKVASLIDLYIAEIAPDPCLKTSKFLALATALPDSARDSYDELYHAMDMYLEVHTQLSQEERLKICCGLNYEKLSPQTCSHLSQNTKFPSKTTVQALISKQSKLKNLLHVTPSTTPCNDSPCSSSGAAQKGKKDKINEQVVLYADNFDLSADNEKLRAHLRGMQWRVMELEKFCRKMQVQMAKITKSKGSGHSYAKSLPKFCS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1130 543 Gene3D Potassium Channel Kv1.1; Chain A 2 123 IPR011333 -
Apr3g1130 543 ProSiteProfiles NPH3 domain profile. 192 443 IPR027356 -
Apr3g1130 543 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 543 - -
Apr3g1130 543 PANTHER OS12G0117600 PROTEIN 12 543 IPR043454 -
Apr3g1130 543 SUPERFAMILY POZ domain 5 104 IPR011333 -
Apr3g1130 543 Pfam NPH3 family 193 419 IPR027356 -
Apr3g1130 543 ProSiteProfiles BTB domain profile. 6 71 IPR000210 GO:0005515
Apr3g1130 543 Pfam BTB/POZ domain 6 107 IPR000210 GO:0005515
Apr3g1130 543 SMART BTB_4 6 108 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1130 Apr-Chr3 25846550 25849948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1130 18 523 EF-hand Containing Proteins AT3G44820 25.893 2.24e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1130 - - gmx:100784792 931.784