Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1116 ATGGAGATGGGTTTGATATCGGTAGATAGCTGGGCAGAGGGAAGCCAGTTATACTTCCTCACACACCTCCACTCCGACCACACCCACGGCCTCTCTTCCACGTGGTCCCACGCGCCACTCTTCTGCTCCCCCCTCACCGCCAAACTCATCCCTTCCAAGTTCCCACGCTTCGACCTCTCCCTCCTCCGCATCCTCCAACCTAACACCCCTTACACCCTCTCTCTCTCCTCCCCCTCTCCCACTACCCTCCACGTCACCGCCATCAACGCCTGTCACTGCCCCGGTTCCATCATGTTACTCTTTCGCGGCGAGTTCGGTTGCGTGCTTCACACCGGCGACTTCCGCTGGGAACCAAACTGTGAGAAAGCGAGTGAGGCCAGGCGCGTGCTTCGCCACGCCCTCCAGGATGTTCCCGGGGTCGACGTGCTTTACCTCGATAATACCTATTCTAACCCTATCTACGACTTTCCCCCTCGCCATGTTGCTGCTCTGCAGGTTATTGATATAATTTCGTCGCATCCTGACCATGACATCATCATTGGGATTAACACTTTGGGAAAGGAAGATCTATTGATTGAAATTTCCCGCGTGCTTCAAATTAAGATTTGGGTGTGGCCAGAGCGCTTGCGGACAATGCATCTTCTTGGTTTTAATGATATTTTCACGACGAACACGTCTCTTACTAGAGTAAGAGCTGTTCCTCAATATAGCTTCAGCGTTGAAACTTTAGAGGCGCTTAATGCAATGCGCCCAACTATAGGTATCATGCCATCGGGTCTTCCGTGGATAAAGAGATCCCTTCAAAACAATGAGCTTCTTTCTGGTTCCTTTTTGACGTCTCGTTATAAGAGAGGTAAATGGAGTGAAAATAGTGAGGAGGCTCAGATTGATAAGCAAATGGGAAATGTAGGATCATCACCCGAGAAAATTCACCAGTATATGTATTCAGTTCCTTACTCTGACCACTCTAATTTTGAGGAGATAGAGGATTTTATAAAGCTTGTTCGACCTACAAGCTTGAAGGGTATCGTGTCTTCTTCATCATGCTATATTGAACCCATGTACTATTTTGGTCGACTCTGTCGAGTTAACAACCATTCAACGCAACAGTTGCAGAACAGGTATAAAAGGAAAGAAAGCAGCCCTAGAACTTCATTTGGAGGGACTAATGTTGAGTCAGATGGAGGCAGACGGAAGGTTTTGAAGGGTAAATTTTCTGGTGTTCGTGTGAGCAGGTTTAGTATATTGAGAAGAAAGCACCGTGGAGCGAAGATTCAGAAAGATAACAGTCCTGATCAAGACTGA 1305 0.4782 MEMGLISVDSWAEGSQLYFLTHLHSDHTHGLSSTWSHAPLFCSPLTAKLIPSKFPRFDLSLLRILQPNTPYTLSLSSPSPTTLHVTAINACHCPGSIMLLFRGEFGCVLHTGDFRWEPNCEKASEARRVLRHALQDVPGVDVLYLDNTYSNPIYDFPPRHVAALQVIDIISSHPDHDIIIGINTLGKEDLLIEISRVLQIKIWVWPERLRTMHLLGFNDIFTTNTSLTRVRAVPQYSFSVETLEALNAMRPTIGIMPSGLPWIKRSLQNNELLSGSFLTSRYKRGKWSENSEEAQIDKQMGNVGSSPEKIHQYMYSVPYSDHSNFEEIEDFIKLVRPTSLKGIVSSSSCYIEPMYYFGRLCRVNNHSTQQLQNRYKRKESSPRTSFGGTNVESDGGRRKVLKGKFSGVRVSRFSILRRKHRGAKIQKDNSPDQD* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1116 434 SUPERFAMILY Metallo-hydrolase/oxidoreductase 18 338 IPR036866 -
Apr3g1116 434 Pfam DNA repair metallo-beta-lactamase 219 339 IPR011084 -
Apr3g1116 434 PANTHER PROTEIN ARTEMIS 5 394 - -
Apr3g1116 434 Gene3D - 155 322 - -
Apr3g1116 434 MobiDBLite consensus disorder prediction 373 398 - -
Apr3g1116 434 Gene3D - 6 341 IPR036866 -
Apr3g1116 434 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1116 Apr-Chr3 25742817 25744522 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1116 K15341 - gmx:100775842 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1116 3 25742817 25744522 Apr3g1116 3 25742817 25744522 ECH