Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1104 ATGCAATCATTCACGTCCCTTCTCGCGTGTCTTACTTTTCTTACGCTACAACTATTCCAATCCCAAGCTGGTTTACTAGCCCAACCAGTCAACGACCCGAACCAGCCACTCGAACCGGGTCAGTACCCATCCTCCAACACCGTGCCCGCATTCCCCGTTCAGACCCAAGCCCAAACCTGCCGCCTCGACCTCTCCAACGAACTCTTCGGCGGCGTCAAGGACGCCTGCGGCAAAGACCTTGACCGGAGCCGCTGCTGCCCCGTCCTCGCCGCGTGGCTCTTCGCCGCCCACGCCCGCACCGCACTCGAAGTTTCCACCGCTCCGGCGCCGACCAGCGCCGACCTTCCGATGATGCCGGACGACTCGCAGAAGTGTGTGAACTCGCTCCAAGACTCGCTCCTGAGTCGGAACATCCGAATCCCTCAACCAAACGCCACGTGTGACGCTATTCTCTGCTTCTGTGGCATCAGACTCCACCAAATAACGTCGTTAACTTGTTCCGCTGCGTTTAACGTCTCGCTCTCTCACCGAAACGCGACTCCAACCGCTGCCGTTCGCAACTTGGAGAACAATTGTCGCAACTCTTCTTACGCTGGTTGCACCAAATGCCTCGGTGCCCTACAAAAGGTGAAGGGGTACAAGAACGAGACGAAGGGTAATGGAGGGAGTGATAGGGTTAAGAAGATGTTTAACAGGGACTGTCAACTAATGGGTTTGACGTGGTTGCTGGCGAAGAACAAAACGGCGTACATACCTACCGTTTCGGCGGTGTTGCGTGCCATAATGTACAGTGCTCATCCGCATGAATCCAAGTGTAGTCCTGATCAGGAGAACATGCCACTGGCCGTCGATTCGCTTCAGTTCGAGAGTGGGGATGCGTCATCGTGGCCGTCCAAGTTTTGGATTACGGTTTTGCCCCTAATCATTCTCTTGTTTTTCGGCTTTTGTTGA 951 0.551 MQSFTSLLACLTFLTLQLFQSQAGLLAQPVNDPNQPLEPGQYPSSNTVPAFPVQTQAQTCRLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARTALEVSTAPAPTSADLPMMPDDSQKCVNSLQDSLLSRNIRIPQPNATCDAILCFCGIRLHQITSLTCSAAFNVSLSHRNATPTAAVRNLENNCRNSSYAGCTKCLGALQKVKGYKNETKGNGGSDRVKKMFNRDCQLMGLTWLLAKNKTAYIPTVSAVLRAIMYSAHPHESKCSPDQENMPLAVDSLQFESGDASSWPSKFWITVLPLIILLFFGFC* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1104 316 Pfam SPARK 55 221 IPR043891 -
Apr3g1104 316 PANTHER GPI-ANCHORED PROTEIN 9 301 IPR040376 -
Apr3g1104 316 PANTHER OS07G0557700 PROTEIN 9 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1104 Apr-Chr3 25616370 25617612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1104 - - vra:106777532 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1104 3 25616370 25617612 Apr3g1104 3 25616370 25617612 ECH
Apr2g1969 2 25069014 25070390 Apr3g1104 3 25616370 25617612 PCT