Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1100 ATGAGTTCAACAAGCAAAGCATGGATTGTGGCAGCTAGTGTTGGAGTTGTGGAGGCCTTGAAGGACCAGGGCGTATGCAGGTGGAATCACGCTTTGAAATCAGCTCAACAACATCTCAAAAACCATGTTGGATCTTTGTCACAGGCAAAGAAGCTTTCCTCTTCTGCCATGGTTTCTAGTTCTACCAGATTGAAGGGGAAGCAATCAGAAGAGTCCTTAAGAACTGTTATGTACTTAAGTTGTTGGGGTCCCAACTAG 258 0.4496 MSSTSKAWIVAASVGVVEALKDQGVCRWNHALKSAQQHLKNHVGSLSQAKKLSSSAMVSSSTRLKGKQSEESLRTVMYLSCWGPN* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1100 85 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 85 - -
Apr3g1100 85 Pfam Wound-induced protein 10 84 IPR022251 -
Apr3g1100 85 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 85 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1100 Apr-Chr3 25587499 25587756 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1100 - - gmx:100818976 137.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1100 3 25587499 25587756 Apr3g1100 3 25587499 25587756 ECH
Apr2g1956 2 24955296 24955562 Apr3g1100 3 25587499 25587756 PCT
Apr3g1100 3 25587499 25587756 Apr2g1958 2 24964060 24964323 PCT