Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1091 ATGAGGCGAAGAGGTGCAGATTTTCGAAGGCCAGGGAGAAGGAGGCTTCAAGATGTGGTCTGGTGGGCATCTTGTAGTGTTGTCGTTATTTTCTTTATTTATATTCTTACCAAAGGCACCACCAACATTGACTCCACCCACCATTTTTCCAGGGGACCTTTAAGGCATGACAGGATTACAGAAGGCTTCAATGTTACTGAAGACATGTTAAGCGCTGACTCTGTGGCAAGACAGATTAATGATCAAATATCCCTTGCAAAAGCTTTTGTTGTAATTGCCAAGGAAAGTAATAATCATCAATTTGCTTGGGAATTAAGTGCTCAGATTCGCAATTCACAGATTTTCCTCTCAAATGCTGCCACCAGGCGTGCACCTTTAACAATCAAGGAATCTGAACATGCTATTCATGATATGGCATTGTTACTATATCAGGCCCAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGACTAAAAGCAAAAATTCAAGCTCTTGAAGAACAGATGAATTCTGTAAGTGAGAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAGAGCCTATACTGCCTTGGTGTTCGATTGACATCTAAATGGTTCAAAAATCTTAGCTTGCAAAAGAAATTAAAGGACAAAAGACAAGTGGAAATGAAGCTTAAGGATAATAATCTATACCACTTTTGTGTCTTCTCTGATAACATACTTGCTACTTCAGTCGTGGTCAATTCGACTGCAATAAATTCAAAAAATCCAGACATGGTTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTTCCGTAAATGATTTTCGAGGGGTGACTGTTGAAGTTCAAAAGTTTGAAGACTTCAATTGGTTAAATGCTTCGTATGTTCCTGTGCTTAAGCAGCTTCAAGACTCGGAGATACAGAACTACTACTTCAAAGGCAACAGTGATGATAGCAAGACACCTATCAAGTTTCGGAATCCTAAATATCTTTCCATGCTTAACCACCTGAGGTTCTATATCCCTCAAGTTTTTCCTGACCTGAAGAAGGTGGTGTTCTTGGATGATGATGTTGTGGTTCAAAAGGATCTTTCTGGTCTTTTTTCTATTGATTTGAATGGAAATGTTAATGGAGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATATTTGAACTACTCTCATCCTCTAATAAGAACACATTTTGATCCTGATGCTTGTGGATGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGGAAAAGGAATGTGACAGGCATATACCACTATTGGCAGGAAAAGAATGCAGACAGGACATTGTGGAAACTTGGTACCTTGCCACCTGGGTTGTTAACTTTTTATGGACTAACTGAACCTTTGGATCCATCATGGCATGTATTGGGTTTTGGCTATACAAATGTTGATCCTCAGTTGATAGAGAGAGGGGCTGTTCTACACTTCAATGGCAACTCCAAACCTTGGTTGAAGATTGGGATGGAAAAGTACAAGCCTCTTTGGGAAAAATACGTGGATTATTCTCACCCTTTATTGCAACAGTGTAATTTTCATTGA 1605 0.3925 MRRRGADFRRPGRRRLQDVVWWASCSVVVIFFIYILTKGTTNIDSTHHFSRGPLRHDRITEGFNVTEDMLSADSVARQINDQISLAKAFVVIAKESNNHQFAWELSAQIRNSQIFLSNAATRRAPLTIKESEHAIHDMALLLYQAQQLHYDSATMIMRLKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTSKWFKNLSLQKKLKDKRQVEMKLKDNNLYHFCVFSDNILATSVVVNSTAINSKNPDMVVFHLVTDEINYAAMKAWFSVNDFRGVTVEVQKFEDFNWLNASYVPVLKQLQDSEIQNYYFKGNSDDSKTPIKFRNPKYLSMLNHLRFYIPQVFPDLKKVVFLDDDVVVQKDLSGLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRTHFDPDACGWAFGMNVFDLVQWRKRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGMEKYKPLWEKYVDYSHPLLQQCNFH* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1091 534 Pfam Glycosyl transferase family 8 236 508 IPR002495 GO:0016757
Apr3g1091 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 534 IPR029993 GO:0047262
Apr3g1091 534 Coils Coil 156 176 - -
Apr3g1091 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Apr3g1091 534 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 534 - -
Apr3g1091 534 CDD GT8_like_1 229 522 - -
Apr3g1091 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 532 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1091 Apr-Chr3 25526799 25529899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1091 1 534 Glycosyltransferase AT2G20810 78.026 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1091 K13648 - gmx:100792018 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1091 3 25526799 25529899 Apr3g1091 3 25526799 25529899 ECH