Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1086 ATGAGGAAAAATGCTGGTTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGGATTATCCCCTTTTTTGCAAGTTTGCTGGTGTCTGTGAGTCTGGTTCTGACAGCTATTGTTGGGGTGCTTAGTTCTACTGGTGGGGTAGAGCAGTCACCGTTTGAAATCATTTCGTTCAAGGGATCGCAGGATTCTGGTGGATATTTTGTGGAATCAGATATAGAAAGGTCTTTTAATGATAGTGTGGTTGTGAAAATGGAGGCACCTAGGTTTGCATATCTTATTTCAGGCACCAAGGGTGATAGTCTAAGGATGATGAGGACATTACAGGCAGTGTACCACCCAAGGAATCAATACATCTTGCATTTAGATCTTGAGGCGCCACCCCGGGAAAGGTTGGAATTGGCAAATGCAGTGAGAGCTGATCCAATATTTCACGAAGTAGAGAATGTGCGTGTTATGTCTCAATCCAATTTAGTAACTTATAAGGGTCCAACAATGATTGCATGTACCCTCCAGGCTATTGCAATTTTATTGAAGGAGAGTTCAGGGTGGGACTGGTTTATAAATCTCAGTGCCTCAGATTATCCTCTTGTGACACAGGATGATTTGCTTCATGTTTTTTCGAATCTATCAAGAGATCTCAATTTCATAGAACATACACGCATTGCTGGTTGGAAACTGAACCAAAGAGCAAGACCAATCATTGTTGATCCTGCCCTTTATTTATCTAAGAAATCTGATTTAGCGTTGACTACTCAACGAAGAACACTTCCCACGACTTTTAAACTGTTCACTGGTTCAGCTTGGGTTGTGCTGACTCGATCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCAAGGACTATGCTAATGTATTATACGAATTTTATCTCCTCGCCAGAGGGATATTTTCACACTGTCATTTGTAACACTGAAGAATTCCGACATACAGCAATAGGTCATGATCTTCACTACATTGCTTGGGACACTCCCCCAAAGCAACATCCAATCTCTTTAACTGCGAAGGACTTTGCCAAAATGGTTAAAAGCAATGCACCCTTTGCCCGCAAGTTTGCGAGGAATGATCCTGTGCTAGACAAGATTGACAAAGAACTTTTGGGGCGCACGCATAGATTTTCACCTGGGGCATGGTGTGTCGGGACCTCAGATGGTGGTGCTGACCCTTGTTCTGTACGTGGCAATGATACCGTGTTTAGGCCAGGCCCTGGTGCTGAGAGGCTACATGAGCTGATTCAAGTGCTGTTATCTAAAGAATTTTTAAGCAAGCAGTGTTTGTGA 1302 0.4301 MRKNAGSHSGRMFSDRKWIIPFFASLLVSVSLVLTAIVGVLSSTGGVEQSPFEIISFKGSQDSGGYFVESDIERSFNDSVVVKMEAPRFAYLISGTKGDSLRMMRTLQAVYHPRNQYILHLDLEAPPRERLELANAVRADPIFHEVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSGWDWFINLSASDYPLVTQDDLLHVFSNLSRDLNFIEHTRIAGWKLNQRARPIIVDPALYLSKKSDLALTTQRRTLPTTFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFISSPEGYFHTVICNTEEFRHTAIGHDLHYIAWDTPPKQHPISLTAKDFAKMVKSNAPFARKFARNDPVLDKIDKELLGRTHRFSPGAWCVGTSDGGADPCSVRGNDTVFRPGPGAERLHELIQVLLSKEFLSKQCL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1086 433 PANTHER GLYCOSYLTRANSFERASE 5 426 IPR044610 GO:0015020
Apr3g1086 433 PANTHER BNACNNG43180D PROTEIN 5 426 - -
Apr3g1086 433 Pfam Core-2/I-Branching enzyme 89 348 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1086 Apr-Chr3 25499382 25504955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1086 76 432 Glycosyltransferase AT1G03520 77.311 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1086 - - gmx:100795146 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1086 3 25499382 25504955 Apr3g1086 3 25499382 25504955 ECH