Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1078 ATGGCTTATAGAGCTTCCACTTTCCTTGCACTTGTCCTCATTTCCAATATCCTCCTTGTCACAACAATTGCTGGACGCAGCATTGCCAAGAACTCCAACAACCAGGACAAGAAAGAACCTCAATGGTTGTTCAAATCTGATGGAAGGGTGCATATTCCTGGAATTGGACGTGTAGGATTTCCACCTAAATATCATATTACACCTCAAAATCCATTTACTGGAGGCAATGGAGGGGCAAGAACAGGAACAGGATCGACAGGTCGCAGTTATGTTCCAGGTGGTGATGACACTTATGTACCAAACCCAGGTTTTGAAGTTCCAATTCCTGGCAGTGGTGGTAGAGTTCCAGGAGCAGTTCATCCATGA 366 0.4508 MAYRASTFLALVLISNILLVTTIAGRSIAKNSNNQDKKEPQWLFKSDGRVHIPGIGRVGFPPKYHITPQNPFTGGNGGARTGTGSTGRSYVPGGDDTYVPNPGFEVPIPGSGGRVPGAVHP* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1078 121 MobiDBLite consensus disorder prediction 64 96 - -
Apr3g1078 121 MobiDBLite consensus disorder prediction 69 90 - -
Apr3g1078 121 PANTHER CELL WALL PROTEIN-RELATED 1 121 IPR034565 -
Apr3g1078 121 PANTHER CELL WALL PROTEIN-RELATED 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1078 Apr-Chr3 25425267 25425632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1078 - - vra:106755985 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1078 3 25425267 25425632 Apr3g1078 3 25425267 25425632 ECH
Apr3g1078 3 25425267 25425632 Apr2g1938 2 24838686 24839054 PCT