Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1052 ATGTTGCAAAAGGTGTGCAAGAGATATAGAAACATGGTGGTTGGAAATGGTTTGTTTTATCCCGTTTTTGGTTTTGCATCACTGGTGTTGTTCATTTATATGTCTTTTGGAGACGTCAGGTTTGGATTTGAGGAAGAGCCTGAATTGGCTTTTGTGGAGAGAAACGGGTCACAGTTTGTGGTGGATGGAAAAGCGTTCTACATTAATGGGTGGAATTCTTACTGGTTAATGGTGCAATCTGTGGATGAGTATTCTAGGCCCAGGGTACGTGAAATGCTGAAAGCTGGGTCCAAGATGGGTCTCACTGTTTGTAGAACTTGGGCATTTAATGATGGTGACTATAATGCCCTTCAGACTTCCCCTGGAGTGTTCAATGAACAAGCTTTCAAGGCCTTGGACTACGTTATAGCAGAAGCAAGGAAACATGGAATTAGGCTTCTCCTTAGCTTAGTAAATAACTTGCACGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGCAAGAAGGAGTAGGGTTAAGCTCATCTAATGATTCTTTCTTCTTTGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTATTCTGACAAGGAAGAATACTATAACTGGAATTGAATATAGAAATGACCCCACCATTTTTGGCTGGGAATTGATTAATGAACCTCGGTGCATAACTGATCCCTCTGGTGACACTCTCCAAGATTGGATAGAGGAAATGTCAGCTTTTGTCAAATTGATCGACAAGCGCCATCTGGTGACTGTTGGACTTGAAGGTTTCTATGGTCCTAATGACCCAAAAAGGTTAACTGTTAACCCTGAGGAGTGGGCATCTAGACTTGGATCTGACTTTATAAGGAACTCCAACATCTCAAATATTGACTTCACCTCTGTCCACATCTACCCTGATCACTGGTTTCATGAGCAGGTATTTGAAGACTACATGAAATTTGTCGCTAAGTGGATGCTTTCCCACATTGAAGATGGTGACAAAGTGTTGAACAAGCCTGTCTTGTTCTCTGAATATGGATTATCAGACATAAATTTTACGTTGTCTGAGCGACACACGATGTATAAAACAATTTTAGATATAAGCTACAAATCTGCCAAGAAAAACAGGTCTGGAGCTGGTGCTCTAGTTTGGCAATTCTTAGTTGGAGGAATGAAGGAGTTTACTGATGATTTTGGGTTGATCCCATGGGAAAGGTCGTCAGTTCATTCACTATTTGTTGAACAATCATGCAGATTAGCCAAGGTCAAGGGGTGGACTCAAAAGGACACAAGTTTTAAACAATTTTGTTAA 1311 0.4066 MLQKVCKRYRNMVVGNGLFYPVFGFASLVLFIYMSFGDVRFGFEEEPELAFVERNGSQFVVDGKAFYINGWNSYWLMVQSVDEYSRPRVREMLKAGSKMGLTVCRTWAFNDGDYNALQTSPGVFNEQAFKALDYVIAEARKHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRSYFKNYIKTILTRKNTITGIEYRNDPTIFGWELINEPRCITDPSGDTLQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRLTVNPEEWASRLGSDFIRNSNISNIDFTSVHIYPDHWFHEQVFEDYMKFVAKWMLSHIEDGDKVLNKPVLFSEYGLSDINFTLSERHTMYKTILDISYKSAKKNRSGAGALVWQFLVGGMKEFTDDFGLIPWERSSVHSLFVEQSCRLAKVKGWTQKDTSFKQFC* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1052 436 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 15 436 - -
Apr3g1052 436 Pfam Cellulase (glycosyl hydrolase family 5) 88 385 IPR001547 GO:0004553|GO:0071704
Apr3g1052 436 SUPERFAMILY (Trans)glycosidases 51 412 IPR017853 -
Apr3g1052 436 Gene3D Glycosidases 48 423 - -
Apr3g1052 436 PANTHER - 15 436 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1052 Apr-Chr3 25225004 25230772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1052 14 436 Glycoside Hydrolase AT2G20680 69.647 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1052 K19355 - gmx:100811461 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1052 3 25225004 25230772 Apr3g1052 3 25225004 25230772 ECH