Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1045 ATGGATCAATTCTATGAAGAGATTGAAGAGCCAGTGAGTCCTCCAGGACAGTATTTCAACAGTTCGGTGATATGTTCATATGTTTTTGGTTTTCTTGAAGTAGCAGTTCCAATTGATGATTCACAAACTATCTCTTTGCTTAAAGATGTCTTCCTCCCAATCAACCCACGCTTCTCCTCTATCATGGTAAGAGATGAAGATGGTATAATGATATGGAAAAGGGTACAAGTGAGGCCTGAAGAGCATGTAAAGGTTCCAAAGTTTCCTGAAAGCAATGGTTCATCTGGATTGTATGACCAATATTTTGATGACTATGTGTCACAGATTTTAACCGAACGTACACCTCAAAACAAACCATTATGGGAACTTCATATTATTAAATACCCAACAACTAATGCTGCAGGCACATTAATTTTCAAACTTCATCAGGCACTAGGGGATGGTTATTCCCTAATGGGTGCTCTTCTTTCTTGTCTTCAAAGAGCTGATGACCCTTCTCTACCTCTAACTTTTCCTTCATCATCAAAGTCACAACATGCAAAGAAAAGCTTGTTTAAGAGGTTACCTTCAGCTACTTCCTCATTTTTCAGCTCTATATCAGATTTTGGATCAAGTATATTGAAAACAAGAGTGATTGAAGATGACAAAACTCCTATAAGGTCTGGATATGAAAGAACCGAATCTCTGCCTTTTACCTTGTCAAACATATCATTATCTCTTGATCATGTCAAAGTAATCAAGTCCAAGCTTGGAGTGACAATAAATGATGTGCTTACTGGGATGATTTTCTATGGGATTCGGCTTTATATGCAAGAGATTGACTACATGGCTAAAACATCAAATGCTACAGCTGTGGTAATGCTCAATACAAGAAATATCAGAAGTTACCAATCAGTGAAAGAGATGCAAAAACCTGAGGTCAAAAGTCTTTGGGGGAATAAAATTTCTTTCTTACAAATAGCTATACCAAAGCTAATTCAATCCAGAATCTCTAACCCTCTTGATTTTGTTTGGAACGCCCAAAGATTAATCAAGAAGAAAAGACGCTCTTTCAGTGTTTATCTCATAGGTCTGCTCTTGGATTTGGAGATGAAGTTAAGAGGCCCCGAGGCAATAGCTAAAATCATCTACAATACTCTAGGAAACTCTAGTGTTGTTATCTCCAACATATTTGGGCCAATGGAACAAATGGCTTTGGCAAATCATCCTATAAGTGGTGTGTATTTCACCATGACTGGTGGGCCTGAGAATTTAAACGTAACAATTATGAGCTATGTGAAAGTAATAAGAATCACCTTGAGAACACTAAAGGGGTTCATAGATGAACAGAAGTTAAAGTTTTGCATGGAAAAAGCCTACGAAGTCATATTCAAAGCTGCTATGGAGATATCTGAGATGCCCAACAAAAGTTAA 1413 0.3744 MDQFYEEIEEPVSPPGQYFNSSVICSYVFGFLEVAVPIDDSQTISLLKDVFLPINPRFSSIMVRDEDGIMIWKRVQVRPEEHVKVPKFPESNGSSGLYDQYFDDYVSQILTERTPQNKPLWELHIIKYPTTNAAGTLIFKLHQALGDGYSLMGALLSCLQRADDPSLPLTFPSSSKSQHAKKSLFKRLPSATSSFFSSISDFGSSILKTRVIEDDKTPIRSGYERTESLPFTLSNISLSLDHVKVIKSKLGVTINDVLTGMIFYGIRLYMQEIDYMAKTSNATAVVMLNTRNIRSYQSVKEMQKPEVKSLWGNKISFLQIAIPKLIQSRISNPLDFVWNAQRLIKKKRRSFSVYLIGLLLDLEMKLRGPEAIAKIIYNTLGNSSVVISNIFGPMEQMALANHPISGVYFTMTGGPENLNVTIMSYVKVIRITLRTLKGFIDEQKLKFCMEKAYEVIFKAAMEISEMPNKS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1045 470 Pfam WS/DGAT C-terminal domain 311 456 IPR009721 GO:0004144
Apr3g1045 470 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 102 257 IPR004255 GO:0004144|GO:0045017
Apr3g1045 470 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 2 468 - -
Apr3g1045 470 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 2 468 IPR045034 GO:0008374|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1045 Apr-Chr3 25158768 25161692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1045 6 433 Acyl Lipid Metabolism Gene Families AT3G49190 27.594 8.12e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1045 - - gmx:100804927 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1045 3 25158768 25161692 Apr3g1045 3 25158768 25161692 ECH