Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0949 ATGAGAAGGGAGTGCCATCCATTGTTAAGGGGAGGGAGAAGGGATAACAAATATAAACATGGGTTTTCTGAAGCTGAGATGGAGTCACTAGCTAGCATATGTGAGGTTGTGTTGCCTCCTTTGCCAAAGGATACTCTTAAGATCATAAAGGAAGACCAAGCTGATGAAGAGCCTAACAAGTTTGTGCAATCCTTCTGGAACATTTCTGCTTCTGGCTATCCAATTCCACATGAGGTTGCCGAGATATTAGTGAAGAGGGGGTTAATAGAAGCAGTAATACTGATTAGAGTGGTTTTATGGCTGCTAGCAACAAGGCTGGGCACTTTGTTGTTTTGTGGTCTGCTCTGTCTTGGTGGGAAATGGCCCTTTATCAACAACTTCTCAAACATATCTTTGGAGAAAAGAGAAAAGGTTGTGCAAAGGTGGCTGAAGCATAGGTTCCTCACACCTATTAGACTGGCGTTTGCTTACATCAAAGTCTTGTGCCTCTTTGTTTTTTTCTCTTGGGTTGATGAAAATGGTGAAAACCCAGCATGGAAAGCCATTGGATATGAGGTATCAGCTGAGGAGAAATTGACCAACGCCTCCAACACTAGGCCTCTTGAAAAGGGGATTATAGAAACCATGCATGAATCTGACTCAACAATTCTAGAATCTCTTGCTAAGAAAGGCCTCAGTGTTACACTGGACACCAAAAGCAATATCCTCAAAGTGAAATGTGATGCACTAGTTGTTGGGTCAGGTTGTGGTGGTGGTGTTGCAGCTGCTGTTCTTTCAAGTGCTGGCCACAAGGTGGTTGTTCTTGAGAAAGGCAACTATTTTGTTCCTAAGGATTATTCATCTCTAGAAGGGCCTTCCATGGATCAATTATATGAAACTGGAGGGATCCTTGCTTCTGTGGACTCTAGAATACTGGTTTTGGCGGGATCAACTGTGGGTGGTGGTTCTGCTGTTAATTGGTCTGCTTGCATTAGAACACCACACAAAGTACTGAAAGAGTGGTCTGAAGAGCACAAGCTTTCCTTCTTTTCAAGCCAAGAATATCTCTCTGCAATGGAAACTGTGTGTGAGAGGATTGGTGTCACAGATAATTGTACACAAGAGGGGTTCCAAAATCAAGTACTGAGAAAAGGGTGTCAAAATCTTGGCCTTAAAGTTGACTATGTGCCAAGAAATTCATCAGGGAATCATTACTGTGGCTCATGTGGTTATGGTTGTCCAAAAGGAGAGAAACAAGGGACTCAGGCTACATGGCTTGTAGATGCTGTTGACAAAGGTGCTGTAATAATAACAGGATGCAAAGCTGAGAGGTTCTTGTTGGAAAGAAACAGAAGTGGAAATGGCAGAAAGGAGAAATGCTTGGGAGTGATGGCAAAAGCATTAACCAGCAGGGTCACAATAAAGCTGCAAATTGAGGCCAAAGTGACTATTTCTGCTGGTGGGGCACTTTTAACACCCCCTTTGATGATCTCTAGTGGATTAAAGAATAAGAACATTGGAAGGAACCTTCACCTCCATCCTGTCCTAATGACATGGGGATACTTCCCAGAATCAAATTCAGAACTCAAAGGTAAAGTCTACGAGGGAGGCATAATCACTTCAGTCCATAAAGTACCATCAACAGACCCAAAATCTGATTCAAGAGCCATAATTGAAACCCCTTTGCTAGGACCAGCATCCTTTGCTTCACTATGTCCTTGGGAATCTGGACTAGACTTCAAAGAAAGAATGCTAAATTACCCAAGAACTTCACATTTGATCACAATAATAAGAGACATGGCTTGTGGACAGGTAACAACTGAAGGAAGGATCAACTACAAATTGAATGCAATTGACAAAGAGAATATGAAGGCTGGCTTGAAGCAAGCATTGAGGATTCTAATAGCTGCAGGAGCAGTTGAAGTAGGCACACACAGAAGTGATGGTCAGAGAATTAAGTGTAGTGGAATTAGTGAAAATGAAGTGCAAGAGTTCTTAGATACTGTGGATCCAATGGAGGGAGCACTTTCACCAGGTAAGAATTGGAACATATATTGTTCTGCACATCAAATGGGAAGTTGCAGAATGGGTATCAATGAAAAACAAGGTGCAGTTGATGAAAATGGAGAAACATGGGAGGCTGAAGGCTTATTTGTTTGTGATGCAAGTGTGCTTCCAACAGCTGTTGGTGTCAATCCCATGATCACAATCCAAGCAACTGCATATTGTATCTCAAATAGAATATTAGATTATCTTGGAAGGGATCAAATGTCATAA 2256 0.4202 MRRECHPLLRGGRRDNKYKHGFSEAEMESLASICEVVLPPLPKDTLKIIKEDQADEEPNKFVQSFWNISASGYPIPHEVAEILVKRGLIEAVILIRVVLWLLATRLGTLLFCGLLCLGGKWPFINNFSNISLEKREKVVQRWLKHRFLTPIRLAFAYIKVLCLFVFFSWVDENGENPAWKAIGYEVSAEEKLTNASNTRPLEKGIIETMHESDSTILESLAKKGLSVTLDTKSNILKVKCDALVVGSGCGGGVAAAVLSSAGHKVVVLEKGNYFVPKDYSSLEGPSMDQLYETGGILASVDSRILVLAGSTVGGGSAVNWSACIRTPHKVLKEWSEEHKLSFFSSQEYLSAMETVCERIGVTDNCTQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKQGTQATWLVDAVDKGAVIITGCKAERFLLERNRSGNGRKEKCLGVMAKALTSRVTIKLQIEAKVTISAGGALLTPPLMISSGLKNKNIGRNLHLHPVLMTWGYFPESNSELKGKVYEGGIITSVHKVPSTDPKSDSRAIIETPLLGPASFASLCPWESGLDFKERMLNYPRTSHLITIIRDMACGQVTTEGRINYKLNAIDKENMKAGLKQALRILIAAGAVEVGTHRSDGQRIKCSGISENEVQEFLDTVDPMEGALSPGKNWNIYCSAHQMGSCRMGINEKQGAVDENGETWEAEGLFVCDASVLPTAVGVNPMITIQATAYCISNRILDYLGRDQMS* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0949 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 747 - -
Apr3g0949 751 Gene3D - 648 744 IPR036188 -
Apr3g0949 751 SUPERFAMILY FAD/NAD(P)-binding domain 239 747 IPR036188 -
Apr3g0949 751 PIRSF Lg_Ch_AO 8 750 IPR012400 GO:0046577
Apr3g0949 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 747 - -
Apr3g0949 751 Pfam GMC oxidoreductase 241 508 IPR000172 GO:0016614|GO:0050660
Apr3g0949 751 Pfam GMC oxidoreductase 603 736 IPR007867 GO:0016614
Apr3g0949 751 Gene3D - 225 541 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0949 Apr-Chr3 24411022 24414681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0949 81 741 Acyl Lipid Metabolism Gene Families AT3G23410 64.865 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0949 K17756 - gmx:100776182 1305.81