Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0925 ATGGAGCAAAAACCTAGCAACATAAATTTGTCTGGATTATCTTTGTATCTTGGAAATCTCCTTTGCGGTATCAGAATTAAAGGTTTCCTTTCAATTTTAATTTTGTGTTTGCAGTGTTTGTGGAATTGGGCCTCTGAAAATTGGAAGAGTTGGGCCAAGCGTAATAATCCAGAGCAAGCAGCGAAGCAGAGTTCGAGGTGCATTGAAGATGGTGTAAGACTGTGCAAAGAAGAAGTGATTGCGGTGATGGAAAAGCTGGGAATTAGTGTTGAAAGAGGAGGGGATGGAATAGAGGACTTTGGTGAAGGAGAAATCAGTGAGATGTTCGAAAATGAGGCAACTGTGGCAGAGTTGGAAGAAGCTTTTCATGTGTTTGATGAAAACAAAGATGGGTTTATTGATGCCACTGAGTTGCGGAGGGTGTTGTGTTGTTTGGGTTTGGAGAAAGACTTTGTGCAGTGTCAGAAAATGATTCATGCGGTTGATCAAAATGGAGATCAATTAATTGACCATGCTGAGTTTGTCCTCTTTATGGAACAGAGTTTTTGTTGA 552 0.4058 MEQKPSNINLSGLSLYLGNLLCGIRIKGFLSILILCLQCLWNWASENWKSWAKRNNPEQAAKQSSRCIEDGVRLCKEEVIAVMEKLGISVERGGDGIEDFGEGEISEMFENEATVAELEEAFHVFDENKDGFIDATELRRVLCCLGLEKDFVQCQKMIHAVDQNGDQLIDHAEFVLFMEQSFC* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0925 183 SMART efh_1 153 181 IPR002048 GO:0005509
Apr3g0925 183 SMART efh_1 117 145 IPR002048 GO:0005509
Apr3g0925 183 ProSiteProfiles EF-hand calcium-binding domain profile. 113 148 IPR002048 GO:0005509
Apr3g0925 183 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Apr3g0925 183 PANTHER CALCIUM-BINDING PROTEIN CML46-RELATED 29 182 - -
Apr3g0925 183 Pfam EF-hand domain pair 117 178 IPR002048 GO:0005509
Apr3g0925 183 Gene3D - 100 182 - -
Apr3g0925 183 ProSitePatterns EF-hand calcium-binding domain. 126 138 IPR018247 -
Apr3g0925 183 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 29 182 - -
Apr3g0925 183 CDD EFh 117 178 IPR002048 GO:0005509
Apr3g0925 183 SUPERFAMILY EF-hand 109 178 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0925 Apr-Chr3 24109134 24109685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0925 69 183 EF-hand Containing Proteins AT5G39670 42.017 2.22e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0925 K02183 - gmx:100526868 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0925 3 24109134 24109685 Apr3g0925 3 24109134 24109685 ECH