Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0922 ATGGAGTCCCAAGGTTCCATGTCCATCAAGCTTTTACTACTTCTGTATTTGTCGGTTCTCTGTGTTTCACAGGATTTCGATTTCTACTACTTTGTTCAGCAGTGGCCTGGATCATACTGTGACACACAAAACAGCTGTTGCTACCCAACAACTGGGAAACCCGCTGCAGATTTTGGCATTCATGGGCTTTGGCCTAATAACAAAGATGGCTCTTACCCGTCTAACTGTGATCCTAACAATCGTTTTCAGCAATCTCAGATATCAGACCTCACGAGCAGCTTGCAGAGGAATTGGCCAACGCTAGCATGCCCAAGTGGCAATGGGATCCAATTCTGGACCCACGAATGGGAGAAGCATGGCACTTGCTCCGAGTCAATCCTCAAGCAACATGACTATTTTGAAGCAGCTCTCAATTTGAAGCAAAGAGCTAACCTCCTCCGAGCACTTACAAATGCAGGGATCCAACCAGATGGGGAGTCTTACAGCCTAAGCAGCATCAAGGGAGCTATAAAAGATGCAATTGGTTATACTCCATATATCGAGTGCAATGTGGACTCTTCACGTAACAACCAGCTTTATCAAGTTTACTTGTGTGTGGACACCTCTGGAGCTGACTTCATCGAATGCCCTGTGTTCCCTAAAGGCAAATGTGGATCGCAAATTGAGTTCCCATCATTCTAG 681 0.4581 MESQGSMSIKLLLLLYLSVLCVSQDFDFYYFVQQWPGSYCDTQNSCCYPTTGKPAADFGIHGLWPNNKDGSYPSNCDPNNRFQQSQISDLTSSLQRNWPTLACPSGNGIQFWTHEWEKHGTCSESILKQHDYFEAALNLKQRANLLRALTNAGIQPDGESYSLSSIKGAIKDAIGYTPYIECNVDSSRNNQLYQVYLCVDTSGADFIECPVFPKGKCGSQIEFPSF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0922 226 CDD RNase_T2_euk 26 223 IPR033697 -
Apr3g0922 226 PANTHER RIBONUCLEASE T2 9 226 IPR001568 GO:0003723|GO:0033897
Apr3g0922 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
Apr3g0922 226 SUPERFAMILY Ribonuclease Rh-like 20 225 IPR036430 GO:0003723|GO:0033897
Apr3g0922 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Apr3g0922 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Apr3g0922 226 PANTHER BNAA02G26660D PROTEIN 9 226 - -
Apr3g0922 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0922 Apr-Chr3 23978096 23980372 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0922 K01166 - gmx:100305644 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0922 3 23978096 23980372 Apr3g0922 3 23978096 23980372 ECH