Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0908 ATGGCTCTTTACAGAAACAATGGTGAATTGTTCACCGAGAGAAGAGGCATCATTGATGCAGTTTTCAGTTCTTTTAGAAAAAGTGATCATGGCTCTAGAGTTTTACGTCGTGGTAGAAGGTTTGGTCGGATTACCAAGCAGAGACTTTCACGCTTGATTTTCCTTATCACGGCATTCCTTTCGATTTCTTTAACAGTGTATGGCCTTAAAATGTTTTTTCAAGCTAAAATGGAATCTAGGTTCTCAAATCCGCACAATCTACAAGAAGAACGCAACCTGCAAGAAAATATTATGGTAGCTGAAGTTGGAAAGGCACCTAAAGGCAAGCGCCGAAAGCATTTTCCGTGTGAAGTTGGATTTCGGGAATCAGTAGATGGCCTTGTTGAACCCAAAAATTATATGAACTTTACATGGTTCTCTCTAAAGTACGTTGACCATGAAGAAAAAACATCCAAAATTGATTTATTTGAACCTCGATTTGGAGGACATCAGACTCTAGAGGAAAGAGAAAATTCATTTTATGCAAAAAACCAGACACTCAATTGTGGTTTTGTCAAGGGGCCACCAGGATATCCAAGCACTGGATTTGATATAAATGAAAAAGATAAGACATACATGTTCAGCTGTAAGATTGCAGTTTCTTCTTGCATTTTTGGAAGCTCTGATTTTCTCCGGAGGCCTACAAGTCGACTGATCAGTACATATTCAAAGAGCAATGTTTGTTTTGTTATGTTCATGGATGATGTAACACTCTCCAAACTTTCATCAGAAGGAAACAGTCCTGATGAGAGAGGGTACATTGGCCTATGGAAAATAGTTATTGTAAAAAACTTGCCATATGAAGACATGCGGAGAACTGGCAAGGTGCCAAAATTTTTATCACACCGTCTCTTCCCAAATTCTAGGTATTCAATTTGGCTTGACAGCAAGATGCGACTCAACTCTGACCCTATGCTGATCATTGAATATTTTTTGTGGCGAAGGAAGGCAGAATATGCCATTTCAAATCACTATGATCGCCACAATGTCTGGGAGGAGGTTCTCCAAAATAAGCGCTTAAATAAATACAACCATACAGCAATTGACGAACAGTTTAACTTTTACCAATCTGATGGCCTCCCCAAGTTTGACCCATCAAACCCAAATAATCCTCTTCCAAGTTATGTTCCCGAGGGTTCCTTGATAATCAGGGCACATACACCAATGTCAAATTTATTTTCTTGTCTTTGGTTCAATGAAGTTGATCGATTTACATCTCGTGATCAACTAAGCTTTGCTTATACTTACTTGAAACTCCGGAGAATGAATCCAGAGAGACCATTTCAGCTATATATGTTCAAGGATTGTGAACGCAGAGCATTAGTGAAGCTATTCCGACACAGGGCAGTTTCATCTCCGCCAGAGAATACTTGA 1413 0.3928 MALYRNNGELFTERRGIIDAVFSSFRKSDHGSRVLRRGRRFGRITKQRLSRLIFLITAFLSISLTVYGLKMFFQAKMESRFSNPHNLQEERNLQENIMVAEVGKAPKGKRRKHFPCEVGFRESVDGLVEPKNYMNFTWFSLKYVDHEEKTSKIDLFEPRFGGHQTLEERENSFYAKNQTLNCGFVKGPPGYPSTGFDINEKDKTYMFSCKIAVSSCIFGSSDFLRRPTSRLISTYSKSNVCFVMFMDDVTLSKLSSEGNSPDERGYIGLWKIVIVKNLPYEDMRRTGKVPKFLSHRLFPNSRYSIWLDSKMRLNSDPMLIIEYFLWRRKAEYAISNHYDRHNVWEEVLQNKRLNKYNHTAIDEQFNFYQSDGLPKFDPSNPNNPLPSYVPEGSLIIRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPERPFQLYMFKDCERRALVKLFRHRAVSSPPENT* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0908 470 PANTHER BNAA02G26630D PROTEIN 12 468 - -
Apr3g0908 470 PANTHER ALKALINE CERAMIDASE-RELATED 12 468 IPR006852 -
Apr3g0908 470 Pfam Protein of unknown function (DUF616) 141 460 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0908 Apr-Chr3 23621959 23635343 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0908 - - gmx:100807624 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0908 3 23621959 23635343 Apr3g0908 3 23621959 23635343 ECH