Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0900 ATGTTGGACGGTCGTTCCTGCGTGGTTCCGAGGTTGTTTTCCAGCTCTTGCCAGGCGGAGAACAAGTGGTCTTTCATGACATTCCTGCCGGACTTGGACATAAAAAATGGCAAGCGCCCTTTAGACATCGATGGCGAGGATGAACCCCAGCCAAGGAAGGTTAACAGGCGATTGGATTCTTGCCATCAAGGCGATATGGCTCGAATTTTAGCTCAACAGCAATCCTTTCATGCCGATGATTCTGTTGTTCCACAAATGGATCAGGATCAGAGGGAGGATTGTGAGACATTGAGTAATTGCCCAAGTGTTGAAAAGGCTGAGGCTTTTCCTGCCCAGCTACTGGATGAACGAGCACAGCATCATGCTGGGGATTCTTTGGTGTCTGGTGACTTTCAATCTAATAAACAGCAGCAGGATCAATCTGGGGATTTATCGGATTCTGATGTTCAGCAATCCGATGAACAGCAGATGGAGCTGCAGATTGAGGGTAATTTGTTGGCCGCCAGTGACCAGCCACCTGATGAGCAGCAAGAGCACCATGCTGGGGATTCATCAGATTCTGGTTCTCTTTTGCCCCGCATGAATCGGGACAGCTCAATTGCCTGTCTCAGCCGCTGTTCTAGGTCCGATTATGGTTCTCTGGCATCGCTGAATAGGAGCTTTCGCAACATAATCAGAAATGGTGAGCTATATAGATGGAGGAGACTGAATGGTATCATAGAACACTGGATTTATTTTTCTTGTGCCCTCCTTGAATGGGAGGCCTATGATCCAATTCGCGAAAGGTGGATGCATTTACCAAGGATGGCTTCTAATGAATGCTTTATGTGTTCGGATAAGGAGTCCTTAGCTGTAGGTACTGAACTTCTTGTATTTGGTAGGGAGCTGAGATCCCATGTCATTTATAGATACAGTCTTTTGACCAACTCATGGTCATCTGGAATGAGGATGAATGCTCCTAGATGTTTGTTTGGATCTGCTAGCCTTGGGGAGATTGCAATTTTAGCTGGTGGGTGTGATTCAGATGGTCATATCCTTGACTCGGCTGAGCTATACAATTCAGAGAATCAAACATGGGAAACACTTCCACGCATGAACAAGCCCAGGAAGATGTGCTCGGGGGTATTTATGGATGGGAAGTTTTACGTTATTGGGGGAATCGGTGGAAGTGATTCTAAGCTTCTTACATGTGGTGAGGAGTATAATTTACAGACTAGAACGTGGACAGAAATTCCTAACATGTCCCCAGGAAGATGTGCTAGGGGATCTGAGATGCCTGCAACAGCTGAGGCACCACCTCTGGTTGCCGTTGTAAATGATGAATTATATGCTGCTGATTATGCTGACATGGAGGTAAAAAAATATGATAAGGACAGAAGATTGTGGTTTACCATTGGGAGACTGCCTGAGCGAGCCGTGTCAATGAATGGTTGGGGTCTTGCATTCAGGGCATGTGGAAATAGGCTTATTGTCATTGGTGGGCCTAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGCACCTCCACAATGGAATCTACTTGCCAGAAAACGGTCTGGCAATTTCGTCTATAATTGTGCTGTGATGGGATGCTGA 1614 0.4628 MLDGRSCVVPRLFSSSCQAENKWSFMTFLPDLDIKNGKRPLDIDGEDEPQPRKVNRRLDSCHQGDMARILAQQQSFHADDSVVPQMDQDQREDCETLSNCPSVEKAEAFPAQLLDERAQHHAGDSLVSGDFQSNKQQQDQSGDLSDSDVQQSDEQQMELQIEGNLLAASDQPPDEQQEHHAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRNGELYRWRRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILDSAELYNSENQTWETLPRMNKPRKMCSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEIPNMSPGRCARGSEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKDRRLWFTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEAPPQWNLLARKRSGNFVYNCAVMGC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0900 537 SUPERFAMILY Kelch motif 250 534 IPR015915 GO:0005515
Apr3g0900 537 Gene3D - 237 520 IPR015915 GO:0005515
Apr3g0900 537 MobiDBLite consensus disorder prediction 126 157 - -
Apr3g0900 537 Pfam Kelch motif 320 366 IPR006652 GO:0005515
Apr3g0900 537 Pfam Kelch motif 368 415 IPR006652 GO:0005515
Apr3g0900 537 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 537 - -
Apr3g0900 537 SMART kelc_smart 332 379 IPR006652 GO:0005515
Apr3g0900 537 SMART kelc_smart 288 331 IPR006652 GO:0005515
Apr3g0900 537 SMART kelc_smart 380 428 IPR006652 GO:0005515
Apr3g0900 537 MobiDBLite consensus disorder prediction 169 191 - -
Apr3g0900 537 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 537 - -
Apr3g0900 537 MobiDBLite consensus disorder prediction 125 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0900 Apr-Chr3 23372383 23378613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0900 197 430 EF-hand Containing Proteins AT4G39560 25.214 3.50e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0900 - - gmx:100791897 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0900 3 23372383 23378613 Apr3g0900 3 23372383 23378613 ECH