Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0877 ATGGGACTGGCTCTGGGTTGTCTTCAAGTGGAGCAGTCAACAGTAGCTATCAAAGAAGTTTTCGGAAGATACGAGGATGTGCTTGAACCCGGTTGCCACTGTGTGCCCTGGTTCTTTGGCACCCAAATAGCTGGTTACCTTTCTTTGCGTGTGCAGCAGCTAGATGTTCGCTGTGAAACCAAGACAAAGGACAATGTTTTTGTCACCGTGGTTGCATCTGTCCAATATCGAGCACTGGCAGAGAAGGCAGCGGATGCTTTTTACAAGCTTAGCAATACCAGGGAACAGATTCAAGCCTATGTCTTTGATGTTATCCGGGCAAGTGTTCCGAAGATGGATCTGGATTCCTCTTTTGAACAGAAAAATGAAATTGCAAAAGCTGTCGAAGAAGAACTTGAAAAGGCGATGTCTGCTTATGGGTATGAGATAATTCAGACTCTCATTGTGGATGTTGAACCTGATGTGCGTGTAAAGAGAGCCATGAACGAGATAAATGCAGCTGCAAGATTGAGGGCGGCTGCAAATGAGAAAGCTGAAGCGGAGAAAATTCTGCAGATCAAAAAAGCTGAAGGAGATGCAGAATCAAAGTACCTAGCAGGGCTTGGAGTAGCTCGCCAGCGTCAAGCCATAGTAGATGGCCTGAGGGACAGTGTGCTAGCCTTCTCAGAGAATGTCCCTGGGACAACATCTAAGGATGTAATGGACATGGTTCTGGTGACCCAATATTTTGACACATTAAAGGAGGTTGGTGCATCCTCAAAATCCAATTCTATTTTTATTCCACACGGACCAGGTGCTGTGAGAGATATAGCTTCACAATTTAGAGATGGTCTTCTTCAAGGAAATGTGTCTCATTCTTGA 861 0.4518 MGLALGCLQVEQSTVAIKEVFGRYEDVLEPGCHCVPWFFGTQIAGYLSLRVQQLDVRCETKTKDNVFVTVVASVQYRALAEKAADAFYKLSNTREQIQAYVFDVIRASVPKMDLDSSFEQKNEIAKAVEEELEKAMSAYGYEIIQTLIVDVEPDVRVKRAMNEINAAARLRAAANEKAEAEKILQIKKAEGDAESKYLAGLGVARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQYFDTLKEVGASSKSNSIFIPHGPGAVRDIASQFRDGLLQGNVSHS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0877 286 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 285 - -
Apr3g0877 286 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Apr3g0877 286 SUPERFAMILY Band 7/SPFH domain 45 171 IPR036013 -
Apr3g0877 286 SMART PHB_4 5 165 IPR001107 -
Apr3g0877 286 Coils Coil 118 138 - -
Apr3g0877 286 Coils Coil 157 190 - -
Apr3g0877 286 CDD SPFH_like_u4 10 278 - -
Apr3g0877 286 Gene3D Band 7 domain 41 167 IPR036013 -
Apr3g0877 286 PANTHER BAND 7 DOMAIN-CONTAINING PROTEIN-RELATED 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0877 Apr-Chr3 22837424 22840035 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0877 - - gmx:100805558 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0877 3 22837424 22840035 Apr3g0877 3 22837424 22840035 ECH