Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0873 ATGCTTGCAGCCTCCTTTGTTTTGGTGGTGGAGATTTTGGAGAATCTGGCATATCTAGCCAATGCAAGCAATTTGGTGCTGTATCTGAGGCAGTACATGCACATGTCCCCTTCAAAATCTGCCAACAATGTCACAAATTTCATGGGAACTGCTTTCCTCCTTGCCCTCCTTGGAGGTTTCTTATCTGATGCCTTTTTCACCACTTATCACATCTACCTGATAAGCGCAGTTATTGAATTCCTGGGACTGATTGTGCTAACTATACAAGCTCGTGTACCTTCACTGAAGCCACCAGAATGTGTCCCGTCCACCCCATGCCATGAAGTTAATGGTGGAAAAGCTGCAATGTTGTTTGGTGGACTCTATCTGGTGGCTCTTGGAGTTGGAGGAATTAAGGGATCATTGCCAGCACATGGTGCTGAGCAATTTGATGAGAACACCCCATCTGGAAGGAAACAAAGATCAACCTTCTTCAACTACTTTGTCTTTTGCTTGTCATGTGGTGCCCTTATTGCAGTCACATTTGTAGTGTGGGTTGAAGACAACAAAGGGTGGGAATGGGGTTTTGGAATCTCTACTATTACCATACTTGTATCCATCCCTGTGTTCTTGGCAGGTTCTGCTAGTTATAGGAACAAGATCCCTTCTGGAAGCCCACTTACCACCATTTTTAAGGTACTGGTTGCTGCTTCACTCAATAGCTGCTTCTACAGAAATTCTAGCAGTGCTGTGGTGAACATGACTTCAAGCCCTTCTAACCAACACTCAGGTAGAAAAGAGGCAGGGAAAGAAACCGCCAATGCAAACAAGCAAACTGAAGCAACCCCAACAAACACACTCAAATTTCTCAATAAAGCAGTTGAAAACAAGCCAATTTACTCATCAATGGAATGCACCGTGGAGCAAGTAGAAGATGTTAAAATAGTGCTGAAAGTAATACCCATATTTGCTTGCACCATTATGCTAAACTGCTGCCTGGCTCAACTATCCACATTCTCTGTGGAACAAGCTGCAACTATGAACACCAAACTTGGTTCCTTAAATGTTCCACCAGCCTCCTTACCAATTTTCCCAGTGCTCTTTATAATGATTCTAGCACCAATTTATGACCACATCATCATCCCATTTACAAGGAAAGTGACCAAAACTGAGACAGGCATCACTCACCTCCAAAGAATTGGCATTGGATTAGTCCTCTCTATAGTCGCAATGGCAGTGGCAGCAGTTGTTGAAGTAAAGAGAAAAAGGGTGGCCACTAACTCTGGTTTATTAGACAATCCAACCCAACCACTACCTATCACATTCTTTTGGATTGCTTTTCAGTACTTGTTCCTTGGGTCTGCTGATCTTTTCACTTTGGCTGGGTTGTTGGAATTTTTCTTCACAGAAGCACCAATTAGGATGAGATCTTTGGCCACATCACTTTCATGGGTCTCTTTGGCTATGGGCTACTACCTAAGTTCAGCAATTGTATCAATAGTAAATAGTGTCACTGGTAACTCCTCTCACAGACCATGGCTAGCTGGTGCTAACCTTAACCACTATCACTTAGAGAGGTTTTACTGGCTCATGTGTGTGCTCAGTGCATTGAATTTCCTACATTACCTGTTTTGGGCTATCAGATACAAATATAGAGGAACAGGAACTACAATTGAATGA 1659 0.4298 MLAASFVLVVEILENLAYLANASNLVLYLRQYMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAVIEFLGLIVLTIQARVPSLKPPECVPSTPCHEVNGGKAAMLFGGLYLVALGVGGIKGSLPAHGAEQFDENTPSGRKQRSTFFNYFVFCLSCGALIAVTFVVWVEDNKGWEWGFGISTITILVSIPVFLAGSASYRNKIPSGSPLTTIFKVLVAASLNSCFYRNSSSAVVNMTSSPSNQHSGRKEAGKETANANKQTEATPTNTLKFLNKAVENKPIYSSMECTVEQVEDVKIVLKVIPIFACTIMLNCCLAQLSTFSVEQAATMNTKLGSLNVPPASLPIFPVLFIMILAPIYDHIIIPFTRKVTKTETGITHLQRIGIGLVLSIVAMAVAAVVEVKRKRVATNSGLLDNPTQPLPITFFWIAFQYLFLGSADLFTLAGLLEFFFTEAPIRMRSLATSLSWVSLAMGYYLSSAIVSIVNSVTGNSSHRPWLAGANLNHYHLERFYWLMCVLSALNFLHYLFWAIRYKYRGTGTTIE* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0873 552 SUPERFAMILY MFS general substrate transporter 19 543 IPR036259 -
Apr3g0873 552 MobiDBLite consensus disorder prediction 248 271 - -
Apr3g0873 552 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 549 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr3g0873 552 PANTHER - 1 549 - -
Apr3g0873 552 CDD MFS_NPF4 1 541 - -
Apr3g0873 552 Pfam POT family 73 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr3g0873 552 Gene3D MFS general substrate transporter like domains 1 548 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0873 Apr-Chr3 22788234 22793016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0873 1 549 Organic Solute Cotransporters AT1G69850 75.943 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0873 - - gmx:100808575 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0873 3 22788234 22793016 Apr3g0873 3 22788234 22793016 ECH