Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0868 ATGGATTTCTCATCTTCTCTCCCTCCTACTCTGCACCTCGCCATGGCGGCGTTGCTCGGAGCCTCATTCATGGCCATCTCCGCCTTCTACATCCATCGCCGCACCGTCGACCACGTACTCCACCGTCTCGTCGAAATCCGCCGCGCACCTCTCGACGCCGATGAAGACGGCGGCGGCGACGACGACGACGATCGAAGCAGGTTCGGCCTTGACGAAGGAGAGTCGGAAACGGAAACCGGTCTCAGAAACTATCACGGAACTTCGTCGAGGTCCGTAGACGAGAACTCAAACGTACTTCAGAGCTATAGGATTTCGTCTTCTATGCCGAACGTCGTTTCCGCAACGGAATGGTTCCAAGAGGACCCTAGGAATCGTGCTTCGTCACTCGATAATCTCGAATTCGTTCCTTTGGGGCTTCCGTCTCTTCGAACGGGAGAGAATGCTCAGTTATCGTGCTCCTATAAGAGAATAGCTTCTGTTGGTAGAATTAAGACCCCGAGATCACCGGGGCGTAACACATTCGAAAGCGCAGATGATTCTGATGAGGAGGGAACACAGCTTGCTGATGACACTCGCATCCCTTTCTCAAGTTCTTACGGAATGAATTCAAACATGTGCAGTTTGTCTGGTGTTCCATTCAGAGTGGATGATGCAAACTGTGCAAAAACTCAGATGTATGGAGAGGTTTCAAAGGAAGCAAAAGCTGGTTCAGATATGAACGGTGGTGGAATGACAGATTCAACTTCAGTACATGTAGCTGGGGATGACCTTGTGTTTGTCAATAATGTCTTGCCTGCAAGAAGCATAGGGCATGAGACAACAAATATAGAAGAAGAGGAAGTATGCAAAATGATTCGAGAATGCTTAGATTTGCGTAAGAAATATGTTTACAAGGAAAATGTTGTTCCATGGAAGGCTGAACCTGTGGCAGCTAACTCTGACCCGTATCACTTTGAACCAGTTGAAGCAACAGCACACCACTTTAGGATGGAAGATGGAGTAATACGTGTTTTTGCAAATAAAACTGACACTGAAGAGCTCTTCCCTGTTGCAAGCTCAACCAGATTTTTTACTGATATGCATTACATTCTTAAAGTTATGTCAATTGGGAATGTTCGCTCTGCATGCTACCATAGGCTACGATTTCTTGAGGAAAAATTCCGCCTTCATCTATTACTAAATGCAGATAGGGAGTTTTTGGCCCAGAAAAGTGCGCCACACCGGGATTTTTACAATATTCGAAAAGTTGATACACATATTCATCATTCTGCTTGCATGAATCAGAAGCATCTCCTTCGCTTCATCAAGTCAAAATTAAGGAAAGAACCTGACGAGGTTGTTATCTTTAGAGATGGAAAGTATATGACACTTAAGGAGGTTTTTGAGAGTTTGGATTTGAATGGATATGATCTGAATGTTGATTTGTTGGACGTCCATGCAGATAAGAGCACATTCCATAGATTTGACAAATTCAACCTAAAGTATAATCCTTGTGGACAGAGCAGACTCAGAGAGATATTTTTAAAGCAGGATAATCTTATCCAGGGAAGGTTTCTGGCTGAAGTAACAAGGCAAGTTTTGTCAGATCTTGAAGCAAGCAAATATCAGATGGCTGAGTATAGGATCTCTGTTTATGGAAGAAAACAGAGTGAATGGGATCAGCTGGCTAGTTGGTTTGTCAACAATGCTCTTTATAGTAAGAATGCTGTATGGCTGATCCAGTTACCACGGTTATACAATGTGTACAAGAACATGGGAATTGTTACCTCCTTTCAGAATATTCTGGATAATGTGTTTATTCCTCTATTTGAAGTCACAGTAGATCCAAATTCTCATCCTCAATTACATTTGTTTTTGATGCAGGTGGTGGGATTTGATCTTGTAGATGATGAAAGTAAACCTGAAAGGCGTCCAACTAAGCACATGCCTTCACCATCTGAGTGGACAAATGAATTCAATCCAGCATACTCTTATTACCTTTATTACTGCTATGCAAATTTGTACACTCTCAACAAGCTGCGTGAATCTAAAGGAATGACCACAATAAAGTTGCGGCCTCATTGCGGAGAGGCTGGTGATAGTGATCATTTGGCTGCTGCCTTCCTCCTATGCCATAACATTTCTCATGGGATTAATTTACGTAAAACTCCAGTTTTGCAGTATTTGTATTACCTTGCACAGGTTGGATTAGCTATGTCACCGCTTAGCAATAATTCCCTTTTCTTGGACTATCATCGCAATCCATTGCCCATGTTTTTCCAGCGAGGTCTAAATGTCTCTCTCTCTACGGATGATCCATTGCAAATTCATTTGACCAAAGAGCCACTGCTAGAAGAATACAGTGTTGCAGCAAAGGTGTGGAAGCTCTCTGCCTGTGACCTGTGTGAGATAGCTAGAAATTCTGTCTACCAATCTGGATTTTCACACCAAGCCAAGTTACACTGGCTTGGGAATAAATATTTCTTGAGAGGTTCTGAAGGAAATGATATTCATAAGTCAAATGTTCCCAATCTGAGGATTTCCTTCCGATATGAGACATGGAAAGAGGAGATGCAGTATATTTACGCTGGTCAAGCTACCTTTCCTGAAGATGTAGACCCATGA 2604 0.4305 MDFSSSLPPTLHLAMAALLGASFMAISAFYIHRRTVDHVLHRLVEIRRAPLDADEDGGGDDDDDRSRFGLDEGESETETGLRNYHGTSSRSVDENSNVLQSYRISSSMPNVVSATEWFQEDPRNRASSLDNLEFVPLGLPSLRTGENAQLSCSYKRIASVGRIKTPRSPGRNTFESADDSDEEGTQLADDTRIPFSSSYGMNSNMCSLSGVPFRVDDANCAKTQMYGEVSKEAKAGSDMNGGGMTDSTSVHVAGDDLVFVNNVLPARSIGHETTNIEEEEVCKMIRECLDLRKKYVYKENVVPWKAEPVAANSDPYHFEPVEATAHHFRMEDGVIRVFANKTDTEELFPVASSTRFFTDMHYILKVMSIGNVRSACYHRLRFLEEKFRLHLLLNADREFLAQKSAPHRDFYNIRKVDTHIHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLNGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTRQVLSDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNALYSKNAVWLIQLPRLYNVYKNMGIVTSFQNILDNVFIPLFEVTVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPSPSEWTNEFNPAYSYYLYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDSDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQVGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSTDDPLQIHLTKEPLLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHQAKLHWLGNKYFLRGSEGNDIHKSNVPNLRISFRYETWKEEMQYIYAGQATFPEDVDP* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0868 867 CDD AMPD 356 851 IPR006329 GO:0003876|GO:0032264
Apr3g0868 867 PANTHER AMP DEAMINASE 10 866 IPR006329 GO:0003876|GO:0032264
Apr3g0868 867 MobiDBLite consensus disorder prediction 62 79 - -
Apr3g0868 867 MobiDBLite consensus disorder prediction 52 95 - -
Apr3g0868 867 Pfam AMP deaminase 280 854 IPR006329 GO:0003876|GO:0032264
Apr3g0868 867 PANTHER AMP DEAMINASE 10 866 - -
Apr3g0868 867 Gene3D - 326 850 - -
Apr3g0868 867 Gene3D - 426 516 - -
Apr3g0868 867 SUPERFAMILY Metallo-dependent hydrolases 258 855 IPR032466 -
Apr3g0868 867 ProSitePatterns Adenosine and AMP deaminase signature. 760 766 IPR006650 GO:0009168|GO:0019239
Apr3g0868 867 MobiDBLite consensus disorder prediction 80 95 - -
Apr3g0868 867 MobiDBLite consensus disorder prediction 163 187 - -
Apr3g0868 867 TIGRFAM AMP_deaminase: AMP deaminase 319 854 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0868 Apr-Chr3 22616844 22625224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0868 K01490 - gmx:100793831 1538.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0868 3 22616844 22625224 Apr3g0868 3 22616844 22625224 ECH