Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0860 ATGGAGTATTTCAACAAAGCCAAAGCCGTGAAGCTACGCAGCCACCTCGACAAGTACCTAGTAGTGGATGACGAAGACCACGACAAACTCCGTCAAAGCAGAAAAGGCTCAACAAGAAAAGCAATATGGGAGGTGGAACTAGTACAAGGGAAGACCCAACACGTGAGGTTAAGGAGTTACAACGGGCGTTACTTAACGGCAACGGAGGCGCCGTTTCTCCTTGGCTTTACCGGAAACAAAGTGGTTCAAGCCAATTTCGACGCGGGTTTGGATTGGAAATACGAGTGGGAACCAATAAAGGAGGGTTTGTACGTGAAATTGAGAAGCTGGTGTGGCAAGTATTTGAGAGGCAATGGTGGGACGTTACCGTGGAGGAACTCCGTCACTCACGATGACCCTTCTGTCACTCATAATTGGATCTTGTGGAGTGTTGAGCCTGTGGATTTTCCTTTCGAGAAGAACAGTGTTGCTTCTTCTTTTGCTTCCGATCATGAGATTTCGGCTTCCGAACAACTTGCTTCGCCCTCCTCCGTTTCTTCGTTTCAGACAACAAGTTCGAACAACTTCAGGTCAGGCATGGACTTGTTCCACCGCGCCAAGGCGGTGCGTCTCCGGAGCCACCACGACAAGTACCTGCACGCGGAGGAAGACGAGGAATCAGTGACCCAAGACCGAAACGGATCCTCCAAGAACGCAAAATGGGTGGTGGAGCTCATACCCGAATACGACAACATCATAAGACTCAAGAGCTGTTACGGCAAGTACCTAACGGCGTCAAACCAGCCGTTACTGTTGGGCGTGACGGGACGCAAAGTCGTTCAGAGTCTGCCACGTAGGCTTGATTCTTCCGTGGAGTGGGAGCCTGTGAGGGACGGTGCTCAGGTGAAGCTGAAGACACGTTACGGTAACTTTCTGAGAGCCAATGGGGGGTTGCCACCTTGGAGGAACTCTGTTACGCACGATATCCCGCACAGGACGTCCACACAGGATTGGATCCTTTGGGATGTTGATGTTCTTGAGATCCATGTTGAGTCCCCTGCTCCTCCTCCTGTTCCTCACTCCGATTCTCTTGATTTCGAATCTTCCACTCCTTCTGCTGTTTCCATCAAATCTGCTAACTTCTCAAGACAAGAGTCAACGGATTCCTATGTGGGTTCACCGCCGAAGATGGAGGGGAGGACTATATACTATCATGTTGCTGAGGAAAATGGAGATGTGGATGATGAGAATGTGCAGGGTTATTCTTTGATTTTCAAAGGTAATGGAGTTGAGGACTTGACTAGGAAGTTTGAGGAAGAGACGGGGCTTGAGGGAGTTATTGTGTGTTCTCGAAGTCCTTTGAATGGAAAACTCTATCCTCTTCGTTTGCAGCTTCCTCCCAACAATGTTACCATGCAGGTTGTTTTGGTTCTTCCCTCGTCCAAAGTGGCAAGAGACTTTGAGGAGCAAGGTCTACTGTGA 1461 0.4942 MEYFNKAKAVKLRSHLDKYLVVDDEDHDKLRQSRKGSTRKAIWEVELVQGKTQHVRLRSYNGRYLTATEAPFLLGFTGNKVVQANFDAGLDWKYEWEPIKEGLYVKLRSWCGKYLRGNGGTLPWRNSVTHDDPSVTHNWILWSVEPVDFPFEKNSVASSFASDHEISASEQLASPSSVSSFQTTSSNNFRSGMDLFHRAKAVRLRSHHDKYLHAEEDEESVTQDRNGSSKNAKWVVELIPEYDNIIRLKSCYGKYLTASNQPLLLGVTGRKVVQSLPRRLDSSVEWEPVRDGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTSTQDWILWDVDVLEIHVESPAPPPVPHSDSLDFESSTPSAVSIKSANFSRQESTDSYVGSPPKMEGRTIYYHVAEENGDVDDENVQGYSLIFKGNGVEDLTRKFEEETGLEGVIVCSRSPLNGKLYPLRLQLPPNNVTMQVVLVLPSSKVARDFEEQGLL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0860 486 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 180 483 - -
Apr3g0860 486 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 148 - -
Apr3g0860 486 Pfam Domain of unknown function (DUF569) 193 334 IPR007679 -
Apr3g0860 486 Pfam Domain of unknown function (DUF569) 1 142 IPR007679 -
Apr3g0860 486 MobiDBLite consensus disorder prediction 368 384 - -
Apr3g0860 486 PANTHER ACTIN CROSS-LINKING PROTEIN 180 483 - -
Apr3g0860 486 PANTHER ACTIN CROSS-LINKING PROTEIN 1 148 - -
Apr3g0860 486 Gene3D - 201 320 - -
Apr3g0860 486 MobiDBLite consensus disorder prediction 368 387 - -
Apr3g0860 486 SUPERFAMILY Actin-crosslinking proteins 5 145 IPR008999 -
Apr3g0860 486 Gene3D - 4 146 - -
Apr3g0860 486 SUPERFAMILY Actin-crosslinking proteins 197 338 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0860 Apr-Chr3 22508428 22516232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0860 - - gmx:100785006 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0860 3 22508428 22516232 Apr3g0860 3 22508428 22516232 ECH