Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0846 ATGGAAATGGCTCTATCGCGCAGTTCTTTATCGTCATTATCCTCGAATCTCGTGAAACCTATGTCATCCATCTTATCGCTACGACGTCGTTCGATCTCCTCATCCTCGGAGCCCCTCACGGTAGAGACCTCCGTCCCATTCACCTCTCACAACTGCGACGCGCCCTCACGCTCCGTGGAGACCTCAGCCGCGGAGCTCTTCTCATTCTTCCGCGACATGGTGGTGATGCGGCGGATGGAGATCGCTGCAGACTCTCTCTACAAGGCGAAGCTGATCCGCGGGTTCTGCCACCTCTACGACGGCCAAGAGGCGGTGGCGGTGGGGATGGAAGCGGCGATAACAAAAAAGGATTGCATCATCACCGCGTATCGCGACCACTGCACGTTCCTGAGCCGCGGCGGAACGCTGATGGAGGTGTTCACAGAACTCATGGGGCGGCGCGAAGGGTGCTCGAAGGGGAAAGGTGGTTCAATGCATTTTTACAGAAAGGAGGGTGGTTTCTACGGTGGACATGGGATTGTTGGGGCTCAGGTTCCGCTTGGTTGTGGTTTGGCTTTTGCTCAGAAGTATTGTAAGGATGAGAATGTGACTTTTGCTTTGTATGGTGATGGTGCTGCCAATCAAGGACAGTTGTTCGAGGCGCTTAATATTGCTGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCATTATGGAATGGGAACTGCTGAGTGGAGGGCTGCTAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTTCTGGATTGAAGGTAGATGGCATGGATGCTCTTGCCGTGAAACAAGCTTGTAAATTTGCAAAGAAACACGCTTTGGATAATGGCCCCATTATTCTTGAAATGGACACATACAGATACCATGGCCACTCCATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAGATTTCTGGTGTGAGACAGGATGTTGAAAAAGAAGTAAGAAAAGAAGTTGACGAAACCATTGCCAAAGCAAAGGAATGTCAAATGCCAGATCCATCTGATCTATTTACCAATGTATATGTTAAAGGTTTAGGTATTGAGGCGTGTGGCGCTGATAGGAAAGAAGTTAGAGCTACTTTGCCCTGA 1119 0.4987 MEMALSRSSLSSLSSNLVKPMSSILSLRRRSISSSSEPLTVETSVPFTSHNCDAPSRSVETSAAELFSFFRDMVVMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHCTFLSRGGTLMEVFTELMGRREGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYCKDENVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVSGLKVDGMDALAVKQACKFAKKHALDNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQDVEKEVRKEVDETIAKAKECQMPDPSDLFTNVYVKGLGIEACGADRKEVRATLP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0846 372 CDD TPP_E1_PDC_ADC_BCADC 69 335 - -
Apr3g0846 372 Gene3D - 21 367 - -
Apr3g0846 372 Pfam Dehydrogenase E1 component 71 318 IPR001017 GO:0016624
Apr3g0846 372 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 318 372 - -
Apr3g0846 372 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 14 319 - -
Apr3g0846 372 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 318 372 - -
Apr3g0846 372 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 14 319 - -
Apr3g0846 372 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 55 353 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0846 Apr-Chr3 21988245 22004504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0846 3 372 Acyl Lipid Metabolism Gene Families AT1G24180 73.671 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0846 K00161 - gmx:100813933 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0846 3 21988245 22004504 Apr3g0846 3 21988245 22004504 ECH