Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0841 ATGCCTCGCGCCCTCCGTCACGTCCTCGCCGCATGGATCATCGCGTTGTTGGGGTGTCGTTTCACCCCGGCACACGCTCTGAAGGTGCCCTTTAGACTAAACGACGCCCTCCCCGTGCTGCCACGTGGCATATCGTGGCCCGTCCTGAATAACCTCCACAGCGCCGTGGACTTGCTCCCTTATTTCGTTGGCTCCCTCACTCCCACCAACGCTTCCATCCACTGGAAAGGCGCTTGCTTCCATCGCAACACAGCCACTCTTCACTTCACCCCCTCTTCCCAGGGTGCCATTCTCTATCTCAAGACAGAGGCTGCACATAGCTGGACATGCATGGATCTCTATGTTTTCGCAACACCCTACAGGGTTACCTGGGACTACTACTTCTCTTCGCGGGAGCATACTTTGAACTTTGACTCGTGGGAAGACCCTGCGGAGTTAGAATATGTGAAGCAGCATGGCGTTTCCGTGTTTCTAATGCCGTCGGGGATGTTGGGAACGTTGCTTTCTCTCATTGATGTTTTGCCGTTGTTCTCTAACACTGCATGGGGTCAGAAAGCGAACCTGGAGTTTTTGAAGAAGCACATGGGGGCTACGTTTGAGAAACGCAAGGGGCCATGGCGTGCGACCATTGATCCTGCAGAGGTTCATACTGGGGACTTTTTAGCCGTGTCGAAGATCCGTGGCCGGTGGGGTGGATTTGAGACGCTGGAGAAGTGGGTGACTGGTTCATTTGCCGGTCACACTGCGGTCTGTTTGAAGGATGAATTGGGAAATTTGTGGGTTGGGGAATCGGGACACGAGAATGAAAAGGGTGAAGAAATAATAGGGGTGATTCCGTGGGAAGAGTGGTGGGAATTGGCTCTTGAAGATAGTTCCAATCCGCAGATTGCGTTGCTTCCCCTTCATCCGGATATACGAGCGAAATTTAACTCCACTGCAGCGTGGGAGTATGCGCGGAGCATGTCTGGCAAGCCTTATGGTTATCATAATATGATATTCAGTTGGATTGATACTGTAGCTGACAACTATCCTCCACCTCTTGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCTTATTCTGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGGTTTGGATTTGCATGATATTATAGTAGAAACTGAGAAGCGTGGGATACCTTTCGATCAATTACTCACCATTCCAGAACAAGATGAATGGGTGTACAGTGATGGGAAGTCGACAACTTGTGTTGCCTTTATCCTTTCAATGTATAAAAAGGCTGGAATTTTTGGTCCCATTTCTAGCTCCATTCAAGTAACTGAGTTCACTATACGTGATGCATACATGCTCAGAATTTTTGAAGACAACCAAACACACCTACCAAGTTGGTGCAACAATGAGAATGACCAGCTTCCATTCTGTCAGATTCTTGGTGAGTATAGGATGGAACTGCCTGGCTATAACACCTTGGAGCCTTATGCCAACATGAATGAGTACTGCCCTTCTCTTCCTCCAACATATGATAGGCTTTCTCGATGTTAG 1560 0.4872 MPRALRHVLAAWIIALLGCRFTPAHALKVPFRLNDALPVLPRGISWPVLNNLHSAVDLLPYFVGSLTPTNASIHWKGACFHRNTATLHFTPSSQGAILYLKTEAAHSWTCMDLYVFATPYRVTWDYYFSSREHTLNFDSWEDPAELEYVKQHGVSVFLMPSGMLGTLLSLIDVLPLFSNTAWGQKANLEFLKKHMGATFEKRKGPWRATIDPAEVHTGDFLAVSKIRGRWGGFETLEKWVTGSFAGHTAVCLKDELGNLWVGESGHENEKGEEIIGVIPWEEWWELALEDSSNPQIALLPLHPDIRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRLQPAYSANMWNEALNKRLGTEGLDLHDIIVETEKRGIPFDQLLTIPEQDEWVYSDGKSTTCVAFILSMYKKAGIFGPISSSIQVTEFTIRDAYMLRIFEDNQTHLPSWCNNENDQLPFCQILGEYRMELPGYNTLEPYANMNEYCPSLPPTYDRLSRC* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0841 519 PANTHER OS01G0793500 PROTEIN 8 519 - -
Apr3g0841 519 Gene3D endopeptidase domain like (from Nostoc punctiforme) 214 343 - -
Apr3g0841 519 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 8 519 - -
Apr3g0841 519 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0841 Apr-Chr3 21873044 21878270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0841 - - gmx:100815535 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0841 3 21873044 21878270 Apr3g0841 3 21873044 21878270 ECH