Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0831 ATGAACTGCTTGTCGCAACTGTCATCGTACACTGCTGCCATTGTCGGAAGCACCTCTCGATTCATCGCGAACCGTTCACTTCATCGATGCTCGTTCCCGATAATATCAGAGCATCGTGCCATTAGGTCTTTCCAATCAGAATTCGTGCTCGCTACACGCTGCTATTCCACAAAAAAGGGACGTAGCAAAAGTGGTTCTTCTCGGTTGCAGAAGGTGGAGCCTGAACCGGTTATGGAGAAGGACGCTTTCTATGTGGTGCGAAAAGGGGACGTTGTCGGAATCTATAGTAGTCTGAGTGATTCTCAAGCTCAAGTTGGATCTTCTGTATGTGATCCTCCTGTTAGTGTATACAAGGGATATTCATTGTCAAAGGACACTGAGGACTATCTTGTCTCGCACGGACTGAAGAATGCTTTATACACAATTAGAGCTGCTGATTTGAAAGAGGATCTGTTTGGCATGCTTGTTCCTTGCCCTTTCCTGGATCCTTTTTCTACCGAAGAGGGCACATCAAAGAACGATGTATCTAAAAAGAGGTCTGCGGGAGTGCTTGCACAAGATAATGTGCAGGAAGCAAGTATTCTGACATCCCTCTCTGAAGATCCCTTGAGAAAGCTAGTGAAGTTAGATCATGGTGCTGTGGCCAAAGCACCTTCATCACATGAAACTCGGACTTGTATTCTTGAGTTTGATGGTGCATCAAAAGGAAATCCTGGAAAAGCTGGTGCCGGGGCTATTCTGCGAGCTAATGATGGAAGTTTGGTTTGTAGGTTGCGTGAAGGTGTGGGTGTAGCAACAAACAATGCTGCAGAATATCGTGCAATGATATTGGGAATGAAATATGCTCTTAAAAAGGGGTTTACTGGTATTCATATCCAAGGTGATTCCAAACTTGTTTGCATGCAGATTGATGGGTCTTGGAAGGTCAAGAATGAGAACTTGTCTACATTGTATAAGGCAGCAAAAGAACTCAAGGATAAATTTTTATCATTCCAGATTAGTCATGTTCTACGGAACTTCAACTCCGAGGCTGATGCCCAAGCAAATTTGGCCGTCAATCTTGCCGATGGACAAGTCCAGGAAGAGTGTGTAGATTAA 1098 0.4435 MNCLSQLSSYTAAIVGSTSRFIANRSLHRCSFPIISEHRAIRSFQSEFVLATRCYSTKKGRSKSGSSRLQKVEPEPVMEKDAFYVVRKGDVVGIYSSLSDSQAQVGSSVCDPPVSVYKGYSLSKDTEDYLVSHGLKNALYTIRAADLKEDLFGMLVPCPFLDPFSTEEGTSKNDVSKKRSAGVLAQDNVQEASILTSLSEDPLRKLVKLDHGAVAKAPSSHETRTCILEFDGASKGNPGKAGAGAILRANDGSLVCRLREGVGVATNNAAEYRAMILGMKYALKKGFTGIHIQGDSKLVCMQIDGSWKVKNENLSTLYKAAKELKDKFLSFQISHVLRNFNSEADAQANLAVNLADGQVQEECVD* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0831 365 PANTHER PUTATIVE-RELATED 94 360 - -
Apr3g0831 365 ProSiteProfiles RNase H type-1 domain profile. 222 353 IPR002156 GO:0003676|GO:0004523
Apr3g0831 365 Pfam Reverse transcriptase-like 230 351 IPR002156 GO:0003676|GO:0004523
Apr3g0831 365 CDD RNase_HI_like 226 351 - -
Apr3g0831 365 Gene3D - 80 132 IPR037056 -
Apr3g0831 365 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 94 360 - -
Apr3g0831 365 Gene3D - 225 357 IPR036397 GO:0003676
Apr3g0831 365 SUPERFAMILY Ribonuclease H-like 224 349 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0831 Apr-Chr3 21740308 21749718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0831 - - gmx:100809644 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0831 3 21740308 21749718 Apr3g0831 3 21740308 21749718 ECH