Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0813 ATGGGTAAGAAGATTTTGTTACTGGGTCTCACTCTTCACCTCCTATTTGTCACTGTTTGTGTCTCAGCTGCACCATCTACTAGTTCCCCTGCAAAAATTGTTAATGGGCTTCTTTCCAATGCTGTGCCTGCTTTCACCAAATGGGTGTGGTCACTTAAGCCTACCACCAAAACTGCGGTTTCGAGCAGGTCGATGATGAAATTCGAGAGTGGGTACAGTGTGGAGACTGTTTTTGATGGAAGCAAGCTTGGGATTGAGCCTTATGCTGTGGAGGTGTTACCCAACGGGGAGCTTCTCATTCTTGATTCGGCAAATAGCAACATTTATAGGATTTCATCCTCGCTTTCTTTGTACAGCAGACCAAAGCTGGTGGCAGGGTCGGCTGAAGGATATTCTGGACATGTTGATGGGAAGCTCAGGGAGGCAAGGATGAACCATCCAAAGGGGATAACTGTTGATGACCGAGGAAATATTTATGTAGCAGATACTACAAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACAACAATTGCTGGAGGAAAATGGAGCCGTGGAGGGGGCCATGTTGATGGACCGAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCATTACTCATTATAGACAGAGGAAACCGAGCCATCAGGGAGATTCAACTGCACTTCGATGATTGTGCCTATCAATATGGCAGTGGATTCCCACTTGGGATTGCAGTGCTTGTTGGGGCTGGCTTCTTTGGTTATATGCTGGCATTGCTCCAGCGCCGGCTTGGTACAATTGTAGCATCTCAGGATGATCAGGTTCCAGTAACAGTAACATCATCTGTTTCTCAAGGTCCATATCAAAAGCCCTTGAAATTGGTCAGGCCTCCTTTAATTCCATCAGAATATGAACCTGAGAAGCAGGAAGAAGGCTTCTTTGGATCCCTTGGAAAGCTTCTTGCCAACGCTGGTGCATCAATGGTAGAGATAATGGGAGGATTATTTCCTGCTTTCAGAAGAAAACCACAGAGCTACCAATTTCAAAGACAACCACTGGTTCAACAACCTCAGAAGCAAGTAAATGCCTGGCCTGTGCAAGAAAGCTTTGTGATTCCTGATGAAGATGAGCCACCTTCTATTGACACAAGAGCCCCAACCCCTCGAAAAACTTACCCTTTCATGTCCAAGGATGCAGAAAAAATGCAACAATTACGGCAAAGTAGAGCATTCTATAGTGGATGGGATGGAGATCTTCAACAGCAACAACAGCAGCAGCAACAAAAATACCATCATCGCCATCAGTACCGTTCATCAGTTCCTCATACTTACTATGAGCAGAATCATGAGACGACTAATGAGATAGTGTTTGGGGCAGTGCAAGAACAGGATAAGAAGCAGGAGTCTGTGGTTATCAAGCCTGTGGATTATGGGTATTCACTGTATGAACATAATAATATTAGGTCCAGAATGAGTTCTATGGGTTATGGCCAAAGGTATTGA 1512 0.4431 MGKKILLLGLTLHLLFVTVCVSAAPSTSSPAKIVNGLLSNAVPAFTKWVWSLKPTTKTAVSSRSMMKFESGYSVETVFDGSKLGIEPYAVEVLPNGELLILDSANSNIYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLIIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAVLVGAGFFGYMLALLQRRLGTIVASQDDQVPVTVTSSVSQGPYQKPLKLVRPPLIPSEYEPEKQEEGFFGSLGKLLANAGASMVEIMGGLFPAFRRKPQSYQFQRQPLVQQPQKQVNAWPVQESFVIPDEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSRAFYSGWDGDLQQQQQQQQQKYHHRHQYRSSVPHTYYEQNHETTNEIVFGAVQEQDKKQESVVIKPVDYGYSLYEHNNIRSRMSSMGYGQRY* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0813 503 Pfam NHL repeat 145 170 IPR001258 GO:0005515
Apr3g0813 503 PANTHER - 1 503 - -
Apr3g0813 503 PANTHER NHL REPEAT PROTEIN 1 503 - -
Apr3g0813 503 SUPERFAMILY NHL repeat 73 231 - -
Apr3g0813 503 Gene3D - 44 229 IPR011042 -
Apr3g0813 503 MobiDBLite consensus disorder prediction 375 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0813 Apr-Chr3 21294775 21298043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0813 - - gmx:100781836 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0813 3 21294775 21298043 Apr3g0813 3 21294775 21298043 ECH