Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0802 ATGGAAGAGCAACAACAACAAAAACAACAACAGGAAGGTCCTATCCCCCTTGACTGGAAACGACTCCTCCCCGACGAGGACCCTCCGCCGCCGGAACTTGTCGTTATGACGCCGTCTTCCATAGCCTCCGATCAGTTCTCCGATGATGGCTTCGATTTTTACTCCGATCACAAACTCAGGGAATCGATTCAGAGCATGGCGAAGACACTCGAGGGAACGGGTAAGAATTTGAAGGACGGTGGTGCCAAGCTCCGTGTCACCATCGACCGCTACCGAGAAGAGCTTAGTCGTCGAGAACACAAACGCCTTCATCAGGATGTTGAAGAGGACCAGAAGAAGCAGTCCCGACAAGCTACCAGCTCAAGTGCTGTTGGCGAGGGGGTGTGTAAGGACTTGAGAGAAGAGATATCATCTCAAGCGCAGTCACAATCCTCGTTTGCATCTTGTTTTGTCAAGAAAATGAAAGATGATACTAATTGTACAGATGTTGGTGCATTTAAAAAGGAGTTATCACGTTTCAAACATTGCAACAACCGGACAACACGAGGCAATGGAGAATCTAAAGGAAAAAAGAGACATCGATCATCATCAAGACGATTGTCATTTCAGTGCCCTAGCAATCTTTCGAAACGTGGTACTTCTAGTGATGATAAAACTTGGAGAGCAACTTCCACACTCTCTCTGCAGAATATTGGGAGAAACCTGTCAAGATGCTATCCAAAAGTGAAGGATGCTTCTCTGGAAATTCATTCTGATGGCTCAAGGTCTAGGAAGGGTCAGCCCATTGTTCTTGATGATGATGATGACGACAACGACTATGATGAACTTCATATTGTGGAGCAAACAGAAAATGGATTTGCTGAGCACCTGAAAGAAGCTAAGATCTATTTCCCATCAAGAGATGATCCAGAGTGTGTTGAAATTTGTTACACAGACACTGATTGCCTTGCCCCTGAAGGCTATTTAACATCAACTATTATGAATTTCTACATTCGATATTTGCAGCAGCAAGCATCACTGACAAATAGATCGTTATCTGACTACCATTTTTTCAATACATATTTCTATAAGAAGCTTAAAGAAGCTGTTTCCTACAAGCAAAGTGACAGAGAGATGATCTTTGCGAGGTTCAGAAGATGGTGGAAAGGTGTAAATATTTTTCAGAAGGCATATGTTTTGATTCCTATACATGAGGATCTTCATTGGAGCTTGATCATTATTTGTATTCCGGACAAAGAAGATGAATTGGGGCCAATCGTTCTTCATTTGGATTCTCTGGGTCTTCACTCTAGTAAATCAGTTTTTGATAATATTAAGAGCTATTTGATTGAAGAAAGGAACTACATGGATCGAGAATGTGTATCATCAGATGTTTCAATTGCAGACAGAATATGGAAGTGCCTTCCTCGTAGAATTGAATCTCAAATCATTGCGGTTCCCCAACAGAAGAATGAGTATGATTGCGGTCTTTTTGTATTGTACTTCATTAAGAGATTCATGGAAGAGGCACCGGAAAGACTGAAAAAGAAAGATTTAGCTATGTTTGGTAAGCGATGGTTCAAACCCGAAGAGGCATCCGGTTTGAGGGTGAAAATCCGTAAATTGCTTGTAGAAAAATTACAAAGTTCAATCAGGCATAATTGTAAGTCAGAATCTCCTCCTCCTTCATCTGCTGGCACTGCAACCGATTGTGTTGAGACTACTGAGGACCTTTCGTCCTAA 1722 0.421 MEEQQQQKQQQEGPIPLDWKRLLPDEDPPPPELVVMTPSSIASDQFSDDGFDFYSDHKLRESIQSMAKTLEGTGKNLKDGGAKLRVTIDRYREELSRREHKRLHQDVEEDQKKQSRQATSSSAVGEGVCKDLREEISSQAQSQSSFASCFVKKMKDDTNCTDVGAFKKELSRFKHCNNRTTRGNGESKGKKRHRSSSRRLSFQCPSNLSKRGTSSDDKTWRATSTLSLQNIGRNLSRCYPKVKDASLEIHSDGSRSRKGQPIVLDDDDDDNDYDELHIVEQTENGFAEHLKEAKIYFPSRDDPECVEICYTDTDCLAPEGYLTSTIMNFYIRYLQQQASLTNRSLSDYHFFNTYFYKKLKEAVSYKQSDREMIFARFRRWWKGVNIFQKAYVLIPIHEDLHWSLIIICIPDKEDELGPIVLHLDSLGLHSSKSVFDNIKSYLIEERNYMDRECVSSDVSIADRIWKCLPRRIESQIIAVPQQKNEYDCGLFVLYFIKRFMEEAPERLKKKDLAMFGKRWFKPEEASGLRVKIRKLLVEKLQSSIRHNCKSESPPPSSAGTATDCVETTEDLSS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0802 573 Pfam Ulp1 protease family, C-terminal catalytic domain 321 524 IPR003653 GO:0006508|GO:0008234
Apr3g0802 573 MobiDBLite consensus disorder prediction 94 126 - -
Apr3g0802 573 ProSiteProfiles Ubiquitin-like protease family profile. 306 499 IPR003653 GO:0006508|GO:0008234
Apr3g0802 573 MobiDBLite consensus disorder prediction 1 33 - -
Apr3g0802 573 MobiDBLite consensus disorder prediction 177 219 - -
Apr3g0802 573 MobiDBLite consensus disorder prediction 546 573 - -
Apr3g0802 573 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 54 552 - -
Apr3g0802 573 MobiDBLite consensus disorder prediction 94 115 - -
Apr3g0802 573 SUPERFAMILY Cysteine proteinases 297 538 IPR038765 -
Apr3g0802 573 Gene3D - 297 537 - -
Apr3g0802 573 Gene3D - 348 476 - -
Apr3g0802 573 PANTHER UBIQUITIN-LIKE PROTEASE 4 54 552 - -
Apr3g0802 573 MobiDBLite consensus disorder prediction 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0802 Apr-Chr3 21005737 21027426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0802 K16287 - gmx:100790705 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0802 3 21005737 21027426 Apr3g0802 3 21005737 21027426 ECH