Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0800 ATGCACAACATGAGCACCCTCTTTCTCTTCATCCTTCTATCCACACTCAGTGTTGGTTTGGCTGGTCGCGACTTAGGAAATAAAAACCCGTTCACCCCAAAGGCTTTCGTGGAACGCTATTGGGACAAACACGTGCGCAACAATTTGCCAAAGCCGTCGTTCCTTCTCTCAAAGGCGTCACCACTTAGCGCCGCGGATACGGCCTCGTTTTCGAAGCTCGTCGCCACCAACACCCTCTCCACGCGGCTTCCGGAGTTCTGCTCCGCCGCGCACCTCCTCTGCTTCCCGGAGGTGCAGCCAAGCCTGGCAAAACACACCGAAGACGTCAACTTCAAAAAATACGACGACGGCCAGAACTTCACCAACTACGGAACGGGTAGACCTGGTGGAGTCGACTCGTTCAAGAACTACTCCAACGGCCTCTTCAGCACGCCGGTGAACGATTTCCGGCGATACAGCCGCGGCTCCGCCGGCCACGAAGATAGCTTCATCAGCTACGCCAACGACACCAATGTTGCCGACCAGAGTTTCCACACATACGGCACCAACGCCGCCGGCGGCTCGGGCGAGTTCAAACAATACTCCAGCGAATCAAACGTCCCGAACCTGGATTTCACCTCCTACTCCGACAGCACCGGCGGGAGAACCCAATCGTTCTCACGCTACAGCGAAGACGGTAACTCCGGCGGCCAAACTTTCACGAGCTACGGCAAGAACTCGGCCGGAGCTGGCAACGATTTCAACAGCTACGGAACAAACTCGAACGTTGCATCGTCGAGTTTCACGAACTACGGCGAACAAGGCGCTGGTCCAAACGACACGTTCACTAACTACGGCGTTAACATGAACGTCCCCGAAGAGACTTTCAAGAGTTACGCTGATGGAACCCACGGTGGCACAGAGAGCTTCGCCAATTACAGAGACCAAGCCAACGTGGGTGACACGTCATTCCAATCCTACGCTAAGAACACCGAAGAAGGAACCCAAGTTGATTTCCTCAACTACGGGAATTCCGCCAACATAGGTTCTGATACATTCAAAGGCTACACTAAAGGAGCAGAAGGGGATCACAAGGTGGGTTTTACTGGTTACGGCGTTAACACGACGTTTAAGGATTACTCGAAAGAGGGTGTTTCTTTCGCTAGTTACACTAACGCCTCCACCTCCTCCGTTTCGAAAACGGTTAGCGAGAGTTTGGTAAAAAGGTGGGTGGAACCGGGTAAGTTCTTCCGCGAGAGGATGCTCAAGGAAGGGACGGTGATGCCTATGCCGGACATAAGAGATAAAATGCCGCAAAGGTCGTTTTTGCCCCGATCCATTTTGACCAAATTGCCCTTCTCGTCTTCAAAAGTTGACGAGTTGAAGCGCGTGTTCAAGGTGTCTGATAACTCCTCTATGGACAAGATGATTATGGATTCATTGGGCGACTGCGAGAGGGCACCCAGCGTGGGTGAGACCAAGCGATGCGTGGGCTCCGTCGAGGATATGATTGATTTTGCAACCTCTATTTTGGGACATAACGTGGCGGTTTGGACCACTCAGAATGTGAATGGCTCCAATAACAACGTCATGTTGGGTCGGGTCAAGGGAATGAACGGTGGGAAAGTAACCAAATCCGTCTCCTGCCATCAGAGCTTGTTTCCTTACTTGCTTTACTACTGCCACTCCGTTCCTAAGGTTCGGGTCTACCAAGCGGATCTTTTGGACCCGGTTTCTAAGGCCAAGATTAACCATGGTGTTGCTATCTGTCACTTGGACACAACTGCTTGGAGCCCCACTCACGGAGCATTTATTGCTCTCGGGTCGAGTCCGGGTCGGATTGAAGTGTGCCACTGGATATTTGAGAATGACATGACTTGGACCACTGCTGATTGA 1875 0.5232 MHNMSTLFLFILLSTLSVGLAGRDLGNKNPFTPKAFVERYWDKHVRNNLPKPSFLLSKASPLSAADTASFSKLVATNTLSTRLPEFCSAAHLLCFPEVQPSLAKHTEDVNFKKYDDGQNFTNYGTGRPGGVDSFKNYSNGLFSTPVNDFRRYSRGSAGHEDSFISYANDTNVADQSFHTYGTNAAGGSGEFKQYSSESNVPNLDFTSYSDSTGGRTQSFSRYSEDGNSGGQTFTSYGKNSAGAGNDFNSYGTNSNVASSSFTNYGEQGAGPNDTFTNYGVNMNVPEETFKSYADGTHGGTESFANYRDQANVGDTSFQSYAKNTEEGTQVDFLNYGNSANIGSDTFKGYTKGAEGDHKVGFTGYGVNTTFKDYSKEGVSFASYTNASTSSVSKTVSESLVKRWVEPGKFFRERMLKEGTVMPMPDIRDKMPQRSFLPRSILTKLPFSSSKVDELKRVFKVSDNSSMDKMIMDSLGDCERAPSVGETKRCVGSVEDMIDFATSILGHNVAVWTTQNVNGSNNNVMLGRVKGMNGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYQADLLDPVSKAKINHGVAICHLDTTAWSPTHGAFIALGSSPGRIEVCHWIFENDMTWTTAD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0800 624 Pfam BURP domain 409 621 IPR004873 -
Apr3g0800 624 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 624 - -
Apr3g0800 624 SMART BURP_2 407 623 IPR004873 -
Apr3g0800 624 MobiDBLite consensus disorder prediction 202 234 - -
Apr3g0800 624 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 624 - -
Apr3g0800 624 ProSiteProfiles BURP domain profile. 409 623 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0800 Apr-Chr3 20974622 20977193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0800 - - var:108321369 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0800 3 20974622 20977193 Apr3g0800 3 20974622 20977193 ECH