Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0798 ATGTCTCTGTGTGCTCCACTCTCCTCCACAACTTCACACCCTCTTTCACTCCCTTCAACTTCTCCACTTTCTCTCAGATTTTCCTTCACTTTCCGGGAAAGCAGACACCCAATAACACCACTCAACACCCGTGTCCCTCACAAGGTTCCATTTTCAGTAAGGCCTGGGAGAGTGTTGGTGAAGTCTCAGGCTACCGCACCTGCTTCTTCTGAGGCTGTGAAAGTGACACCTGTGGCTTCTGAGATGAAGGCATGGGTGTATGGGGAATATGGAGGTGTAGATGTTTTGAAGTTTGATTCTAATGTTGGTGTGCCTGAGGTGAAGGAGGATCAAGTTCTTGTCAAAGTTGTTGCTGCAGCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGAAAGTTCAAGGCCACTGATTCTCCTCTTCCGGTTGGTAGTCAAGTAAAGGATTTCAAAGTGGGTGATGAAGTATATGGAGACGTAAATGAGAAAGCACTAGAAGGGCCTAAGCAGTTTGGGTCTTTGGCTGAGTACACGGCTGTTGAAGAGAAATTGTTGGCACCAAAACCTAGGAATTTGGACTTTGCTCAAGCTGCTGCACTTCCTCTAGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGACTGGATTTTCTCCTGGTAAATCTATTCTTATTCTAAATGGTTCCGGTGGAGTTGGAAGCTTAGTTATTCAGCTAGCTAAGCATGTTTTTGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGACCTGTTGAAAAGCTTGGGAGCTGATTTGGCTATTGATTACACAAAAGAGAACTTTGAAGACTTGCCAGAAAAATTTGATGTGGTTTATGATGCCATTGGGCAATGTGACAGGGCAGTGAAGGCTATTAAAGAAGGTGGCAGTGTGGTGGCACTCACAGGTGCTGTTACCCCACCTGGCTTCAGATTTGTAGTTACTTCCAATGGAGCTGTTCTGAGGAAACTAAACCCATATTTAGAGGGTGCAAAGGTGAAGCCAATTGTAGACCCCAAAGGTCCTTTCCCCTTTGCCAAGGTTGCTGAAGCCTTCTCTTACCTTGAAACAAACCGAGCCACTGGAAAGGTTGTAATACATCCCATCCCTTGA 1134 0.4577 MSLCAPLSSTTSHPLSLPSTSPLSLRFSFTFRESRHPITPLNTRVPHKVPFSVRPGRVLVKSQATAPASSEAVKVTPVASEMKAWVYGEYGGVDVLKFDSNVGVPEVKEDQVLVKVVAAALNPVDAKRRQGKFKATDSPLPVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPKPRNLDFAQAAALPLAIETAYEGLERTGFSPGKSILILNGSGGVGSLVIQLAKHVFGASRVAATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTGAVTPPGFRFVVTSNGAVLRKLNPYLEGAKVKPIVDPKGPFPFAKVAEAFSYLETNRATGKVVIHPIP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0798 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 191 312 IPR036291 -
Apr3g0798 377 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 51 377 IPR044626 GO:0016628
Apr3g0798 377 Gene3D - 89 373 - -
Apr3g0798 377 CDD MDR_like_2 82 373 - -
Apr3g0798 377 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 51 377 - -
Apr3g0798 377 MobiDBLite consensus disorder prediction 1 21 - -
Apr3g0798 377 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 218 239 IPR002364 GO:0008270|GO:0016491
Apr3g0798 377 SUPERFAMILY GroES-like 81 223 IPR011032 -
Apr3g0798 377 Gene3D - 210 324 - -
Apr3g0798 377 SMART PKS_ER_names_mod 91 373 IPR020843 GO:0016491
Apr3g0798 377 Pfam Zinc-binding dehydrogenase 262 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0798 Apr-Chr3 20901760 20905746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0798 K18980 - gmx:100810816 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0798 3 20901760 20905746 Apr3g0798 3 20901760 20905746 ECH