Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0791 ATGGCAGAATCTGTGGATGTCACACACGATGTTCATTCCCTTCTCTCTTCTCCGGAGAGGGACTTTCTTCTTCGTAACAACGGCGATCAGGTTAAAATTGACAGCTTGAAGGGAAAGAAACTTGGTTTATATTTTTCGGCATCATGGTGTGGTCCGTGTCGAAGATTCACACCGACTTTGGTGGAGGTGTACAATGGAGTGGCTTCCAAAGGTGATTTTGAGGTTGTTTTTGTCACAGCTGATGAGGATGATGAATCCTTTAAAGGTTACTTTTCCAAGATGCCATGGCTTGCAATCCCATTTTCTGACTCAGAGACTCGTAGTCGCCTTGATGAATTGTTTCAAGTGAGGGGGATTCCCCATCTTGCATTACTTGATGAAACTGGGAAAGTTGTTACTGAAGATGGATTTGACATTATCCGCGAGTATGGAGTTGAAGGATACCCTTTTACATCGGCAAGGATCCAAGAGTTAAGAGATCAAGAGGAGAAAGCTAGGATGAATCAGTCCTTGAGATCTGTATTGGTGTCTGCATCCCGTGACTTTGTTATATCATCTGATGGAAACAAAATACCTGTGGCTGAGCTTGAAGGCAAGACAGTTGGTCTGTATTTCTATTTGTCTTCTCACAGATCATGCATTGACTTTACTCCACAACTTGTGGAGGTTTGTAATAAGCTGAAGGCCAAGGGGGAGAACTTTGAGATTGTGTTGATACCCCTTGATGATGATGAAAATTCATTCAAGGAAGGATTAAAAAGTATGCCTTGGTTATCCTTGCCTTTCAAGGATAAAACCTGTGAAAAGCTGATTCGGTACTTTGAGCTTTCAACCCTCCCCACTTTGGTTATTATTGGACCAGATGGGAAAACCCTTCATTCTAATGTTGCAGAGGCTATTGAGGATCATGGGGTTGCTGCATACCCATTCACTCCTGAAAAGTTTGTCGAGCTCGATGAAATAATCAAGGCCAAGGAGGCAGCTCAAACCCTTGAATCAATTTTGGTATCTGGAGATCTAGATTTTGTCATTGCGAAAGATGGGGTGAAGATTCCAGTGACTGAATTAGAGGGGAAGATCATCCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCATGCCGTCTCTTCCTTCCAAAACTTATTGATGCATATCATAAGATTAAGGCAAAGGACAATGCATTTGAAGTCATTTTCATCTCAAGTGACAGAGACCAAGCCTCCTTTGATGAATTCTTTGCAGGAATGCCATGGTTGGCACTTCCCTTTGGTGACTCAAGGAAGAAAAACCTGAGTCGCAAATTCAAGGTATCTGGCATCCCCATGCTTGTGGCCATTGGATCAAGTGGCCAGACTGTCACAACAGAAGCGCGACATCTCGTTGCACTTTATGGGGCTGATGCTTATCCTTTCACTCCGGAGAGATTAAAACAAATAGAGGCAGAAAATGAAGAGACTAGGAAGGGGTGGCCTGAGAAGTTGACGGATGAAACACACAAGCATGAACTTGTGTTGACGCGCCGCAGGATTTATAACTGTGATGGTTGTGATGAAGAGGGACGTTTATGGTCTTACTACTGTGAAGAGTGTGACTTTGATCTCCATCCAAAATGTGCATTGGAGGACAAAGGTAGCAAAGATGATGACAAGGAAGAAGTCAAGTCCAAAGATGGATGGGTTTGTGATGGAGAAGTTTGCACTAAAGCCTGA 1707 0.4353 MAESVDVTHDVHSLLSSPERDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRRFTPTLVEVYNGVASKGDFEVVFVTADEDDESFKGYFSKMPWLAIPFSDSETRSRLDELFQVRGIPHLALLDETGKVVTEDGFDIIREYGVEGYPFTSARIQELRDQEEKARMNQSLRSVLVSASRDFVISSDGNKIPVAELEGKTVGLYFYLSSHRSCIDFTPQLVEVCNKLKAKGENFEIVLIPLDDDENSFKEGLKSMPWLSLPFKDKTCEKLIRYFELSTLPTLVIIGPDGKTLHSNVAEAIEDHGVAAYPFTPEKFVELDEIIKAKEAAQTLESILVSGDLDFVIAKDGVKIPVTELEGKIILLYFSAHWCPPCRLFLPKLIDAYHKIKAKDNAFEVIFISSDRDQASFDEFFAGMPWLALPFGDSRKKNLSRKFKVSGIPMLVAIGSSGQTVTTEARHLVALYGADAYPFTPERLKQIEAENEETRKGWPEKLTDETHKHELVLTRRRIYNCDGCDEEGRLWSYYCEECDFDLHPKCALEDKGSKDDDKEEVKSKDGWVCDGEVCTKA* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0791 568 Pfam Thioredoxin-like 198 290 IPR012336 -
Apr3g0791 568 Pfam Thioredoxin-like 39 131 IPR012336 -
Apr3g0791 568 Pfam Thioredoxin-like 358 450 IPR012336 -
Apr3g0791 568 ProSiteProfiles Thioredoxin domain profile. 13 160 IPR013766 -
Apr3g0791 568 CDD TryX_like_TryX_NRX 341 470 IPR045870 GO:0004791
Apr3g0791 568 PANTHER NUCLEOREDOXIN 1-2-RELATED 5 539 - -
Apr3g0791 568 PANTHER THIOREDOXIN 5 539 - -
Apr3g0791 568 SUPERFAMILY Thioredoxin-like 345 453 IPR036249 -
Apr3g0791 568 SUPERFAMILY Thioredoxin-like 184 293 IPR036249 -
Apr3g0791 568 Pfam C1 domain 497 538 IPR004146 -
Apr3g0791 568 Gene3D Glutaredoxin 336 471 - -
Apr3g0791 568 Gene3D Glutaredoxin 174 311 - -
Apr3g0791 568 Gene3D Glutaredoxin 15 152 - -
Apr3g0791 568 ProSiteProfiles Thioredoxin domain profile. 320 480 IPR013766 -
Apr3g0791 568 CDD TryX_like_TryX_NRX 21 150 IPR045870 GO:0004791
Apr3g0791 568 SUPERFAMILY Thioredoxin-like 24 132 IPR036249 -
Apr3g0791 568 ProSitePatterns Thioredoxin family active site. 362 380 IPR017937 -
Apr3g0791 568 SUPERFAMILY Cysteine-rich domain 496 539 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0791 Apr-Chr3 20726415 20729258 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0791 K17609 - gmx:100809224 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0791 3 20726415 20729258 Apr3g0791 3 20726415 20729258 ECH