Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0789 ATGGATCCCAGAGAGGTTCGAACTGAAGCAATTTCGGATGCTGATCAATCAACTCATGCATATCATCTGGCTTTGGATATTGGGGGATCTCTTGCCAAGCTAGTTTACTTCACAAAAGATGATGATCATTTCATTGATGGTGAGGAGGGTATATCTCATAAAAAGGCTATCGAGAAATCCAATGGAAATAACCAATATCATGTTCTTAATGGGAGGCTCAATTTTAAGAAGTTTGAAACGAGCAAGATAAATGATTGTTTAGAATTCATCAAGACCATGAAACTTCATTTTGGAGGCAATCAGTTGCACGAAAATCCTGGAAGTCTTCCGATAGCTGTTAAGGCCACAGGTGGTGGTGCATACAAATATGCAGACCTCTTCAAGGAAACACTAGGAGTCATTCTTGACAAGGAAGATGAAATGGATTGTCTTGTGGCCGGAGCAAATTTTCTTCTGGAGGTGGTCCACCAGGAAGCATTTACTTATATGGGGGATCAAAAGCAATTTGTGCAGATTGACCAGAATGATCTGTATCCCTATCTTCTTGTTAATATTGGGTCTGGCGTTGGCATGATCAAGGTGGAAGGAGAGGGAAAGTTTGAGCGAGTTAGTGGAACAAGTATAGGTGGAGGAACTTTCTGGGGTTTAGGAAAGCTTTTAACCAATTGCAAGAGTTTTGATGAGTTGCTGGAATTAAGTTATCGGGGAAACAACAGGGCAGTAGATATGCTTGTTGGAGATATTTATGGCGGAATGGACTATACAAAGATAGGTCTTTCATCCACTACAATAGCCTCTAGTTTTGGAAAGGCAATTTCTGATAATAAGGAGCGTGAAGATTACAAACCTGAAGATATTGCTCGATCACTGCTAAGAATGATCTCAAATAATATTGGGCAGATCTCTTACTTAAATGCCCTTCGCTTTGGGCTAAAGAGGATTTTTTTTGCTGGATTTTTTATTCGGAGGCACCCATTCACAATGGACACATTATCTGTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCTAAGGCAATGTTTTTGAAGCATGAAGGGTTTCTTGGAGCTGTTGGTGCCTTCATGAGTTCGGATAAACATGGCCTAAAGGAATTATTGGTCAATCAAATGGTTCAAAGAAGTCCCGGCAAGTTATCCTTTGCTGAGGATAAAATACATGATACCCCAGATGGGGAGTTCAATGGAGATGAAAGTATAGAGTGCAGTGTCTATGCAGCGTAG 1239 0.406 MDPREVRTEAISDADQSTHAYHLALDIGGSLAKLVYFTKDDDHFIDGEEGISHKKAIEKSNGNNQYHVLNGRLNFKKFETSKINDCLEFIKTMKLHFGGNQLHENPGSLPIAVKATGGGAYKYADLFKETLGVILDKEDEMDCLVAGANFLLEVVHQEAFTYMGDQKQFVQIDQNDLYPYLLVNIGSGVGMIKVEGEGKFERVSGTSIGGGTFWGLGKLLTNCKSFDELLELSYRGNNRAVDMLVGDIYGGMDYTKIGLSSTTIASSFGKAISDNKEREDYKPEDIARSLLRMISNNIGQISYLNALRFGLKRIFFAGFFIRRHPFTMDTLSVAVNFWSKGEAKAMFLKHEGFLGAVGAFMSSDKHGLKELLVNQMVQRSPGKLSFAEDKIHDTPDGEFNGDESIECSVYAA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0789 412 PANTHER PANTOTHENATE KINASE 5 412 - -
Apr3g0789 412 Gene3D - 240 352 - -
Apr3g0789 412 PANTHER PANTOTHENATE KINASE 5 412 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr3g0789 412 TIGRFAM panK_eukar: pantothenate kinase 22 362 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr3g0789 412 SUPERFAMILY Actin-like ATPase domain 21 157 IPR043129 -
Apr3g0789 412 SUPERFAMILY Actin-like ATPase domain 131 361 IPR043129 -
Apr3g0789 412 Gene3D - 14 171 - -
Apr3g0789 412 Pfam Fumble 22 361 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0789 Apr-Chr3 20707380 20715165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0789 K09680 - gmx:100808162 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0789 3 20707380 20715165 Apr3g0789 3 20707380 20715165 ECH