Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0786 ATGGCAGAGAAGAAGGACCTTCAGACCGTCATCAGAAGGATCGCCTCTGTGACTAACCACCTCACTTCCTCCCACACTTCCCAAGCTCAACTCGCCTTGTTCCACACTTCTACTAGGAACGATACCTACCAACGTGTTCACGGTGAAGTTCCCTCTCACGACGTCGTTTGGAGGGTCGTCGCTTCTGATGAGTCTGGCAAGCCCTTCACTGACATCGTCTACGAGAAGGCCGTTGGAGAGGCAATGGCCAAGATAACTATTAATAGGCCAGAGAGGAGAAATGCGTTCCGACCCCACACGGTTAAGGAGCTTATGCGTGCTTTCAGTGATGCTAGGGATGATAGCTCTATTGGGGTCATCATTCTCACTGGCAAGGGGACTAAGGCATTTTGTAGTGGTGGTGACCAGGCTTTGAGAAACGAAGATGGTTATTCAGATCATGGCAATAATAGTAACCTTAATGTGTTGGACTTGCAGGTGCAGATACGCCGCCTTCCTAAACCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGACATGTACTACATATGGTCTGTGATCTAACCATTGCAGCAGATAATGCCATTTTTGGCCAAACTGGTCCTAAGGTAGGAAGCTTTGATGCTGGTTATGGAAGTTCGATCATGTCCCGTTTAGTAGGTCCAAAAAAGGCACGTGAAATGTGGTTCCTCGCAAGGTTCTATGATGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCACTTGAAAATTTAGAGAAAGAAACAATCAAATGGTGTCGGGAGATACTGAGGAACAGTCCAACGGCAATTCGGGTGCTCAAATCAGCTCTTAATGCGGTGGATGACGGCCATTCTGGACTTCAGGAAATTGGTGGAAATGCAACACTGATATTCTATGGTACAGAAGAAGCTAATGAGGGGAAGACTGCATATCTGCAGCATAGACGCCCAGATTTTTCTAAGTTCCAGCGGCGGCCTTAA 999 0.4735 MAEKKDLQTVIRRIASVTNHLTSSHTSQAQLALFHTSTRNDTYQRVHGEVPSHDVVWRVVASDESGKPFTDIVYEKAVGEAMAKITINRPERRNAFRPHTVKELMRAFSDARDDSSIGVIILTGKGTKAFCSGGDQALRNEDGYSDHGNNSNLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYDAVEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKSALNAVDDGHSGLQEIGGNATLIFYGTEEANEGKTAYLQHRRPDFSKFQRRP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0786 332 Pfam Enoyl-CoA hydratase/isomerase 80 326 IPR001753 GO:0003824
Apr3g0786 332 Gene3D - 53 271 - -
Apr3g0786 332 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 8 332 IPR010198 GO:0008935|GO:0009234
Apr3g0786 332 SUPERFAMILY ClpP/crotonase 69 327 IPR029045 -
Apr3g0786 332 TIGRFAM menB: naphthoate synthase 69 328 IPR010198 GO:0008935|GO:0009234
Apr3g0786 332 CDD crotonase-like 83 268 - -
Apr3g0786 332 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 57 331 IPR010198 GO:0008935|GO:0009234
Apr3g0786 332 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 170 190 IPR018376 GO:0003824
Apr3g0786 332 Gene3D - 272 320 IPR014748 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0786 1 332 Acyl Lipid Metabolism Gene Families AT1G60550 74.481 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0786 K01661 - gmx:100782743 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0786 3 20610808 20614833 Apr3g0786 3 20610808 20614833 ECH