Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0775 ATGGAACAATTGCATTTGGAGCAATGGAAGCAACAAGTTCAAGAGTGGTGGCGCGTGGCTCTCAATCGTCTTCGTGAAGTTCCCCCAATTCAGCTCTACGTTGCTGCCTCTGCCCTTCTTTTCACCACCATTCTCCTCTTCACAATTCGCTTGTTGAAGCGCGTGAAGTCCAACACCATTGTACTCACTGGTCTCTCTGGTGCCGGCAAAACCGTTCTCTTCTATCAGCTTAGGGATGGCTCTATCCACGAGGGTACTGTTACCTCGATGGAACCAAACGACGACGCTTTTATTCTCCATTCCGAAACAACCCAAAAGCGGAAGATAAAACCTGTTCGTGTTGTTGATGTTCCTGGGCATTCGCGGCTTCGACCGAAATTGGATGAGTATTTGCCTCAGGCTGCTGGCATTGTTTTTGTTGTTGATGCTCAAGATTTCTTGCAGAATTGCCGTGCTGCTTCAGAGTATTTGTATGATTTGTTGACTAAGGGAAGTGTTGTGAGGAAGAAGATTCCGTTGCTTATTCTCTGCAACAAGACGGACAAGGTCACTGCTCATTCCAAGGAGTTCATCTGCAGACAGATGGGGAAGGAAATTGACAAATTACGAGCATCAAGAAGTGCAATATCAGCAGCGGACATTGCAAACGAGTTCACCCTTGGGGTACCTGGAGAACCATTTACTTTTGTCCAGTGCTGTAACAAAATTACAGCTGCAGATGCTTCTGGTCTAAATGGGGATATATCTCAGTTGGAAAAGTTTATCAGACAACATGTGGAGCCATAG 786 0.4606 MEQLHLEQWKQQVQEWWRVALNRLREVPPIQLYVAASALLFTTILLFTIRLLKRVKSNTIVLTGLSGAGKTVLFYQLRDGSIHEGTVTSMEPNDDAFILHSETTQKRKIKPVRVVDVPGHSRLRPKLDEYLPQAAGIVFVVDAQDFLQNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHSKEFICRQMGKEIDKLRASRSAISAADIANEFTLGVPGEPFTFVQCCNKITAADASGLNGDISQLEKFIRQHVEP* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0775 261 CDD SR_beta 58 257 IPR019009 -
Apr3g0775 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 193 IPR027417 -
Apr3g0775 261 Pfam Signal recognition particle receptor beta subunit 56 229 IPR019009 -
Apr3g0775 261 ProSiteProfiles small GTPase Arf family profile. 51 255 - -
Apr3g0775 261 SMART arf_sub_2 44 238 - -
Apr3g0775 261 Gene3D - 52 259 IPR027417 -
Apr3g0775 261 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 5 261 IPR019009 -
Apr3g0775 261 PANTHER TRANSFERRIN 5 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0775 Apr-Chr3 20468481 20471532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0775 5 261 Miscellaneous Gene Families AT5G05670 65.504 5.68e-121 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0775 K12272 - gmx:100804789 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0775 3 20468481 20471532 Apr3g0775 3 20468481 20471532 ECH