Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0742 ATGAAGTTTATGAAACTGGGATCTCGTCCAGATACCTTCTACACTGCAGAGTGTGTAAGGACAGTGGCTTCTGAAGTTTCAAGTGACCTCATAATTCAAGTAAAAGCAACTAGATATCTTCTTCACAAGTTTCCCCTCCTATCCAAATGTTTACGCCTGCAAAGGTTGTGCTCACAGAGTCCTGATTCTCCTCAGCATCAAATAGTACAACTCCCTGATTTTCCTGGTGGGGTTGAAGCATTTGAGTTGTGTGCTAAGTTCTGCTATGGTATTACCATCACTCTTAGTGCTTACAACATTGTAGCTGTAAGATGTGCTGCTGAGTACTTGCAGATGAGTGAAGATGTTGAGAAGGGGAACTTAATTTACAAGCTTGAGGTTTTCTTTAACTCTTGCATCCTTCATGGTTGGAAGGACTCAATTGTGACTCTACAAACCACAAAAGCGTTGCCTTTGTGGTCAGAGGACTTGGCAATTGCCAGCAGATGCATTGAAACTATTGCCTCAAAGGTCTTAAGCCACCCCTCAAAGGTGAGTTTGTCACATAGTCATTCCAGGAGGATAAGGGATGATGTGTCTTCTTGCAATGGAACTGAAAGTCTTAGACATAAATCAACAAGTAAGGGATGGTGGGCTGAAGATTTGGCAGAATTGAGCATAGACTTGTATTGGAGAACCATGATAGCTATCAAATCTGGTGGCAAGACACCCTCAAATCTCATTGGTGATGCATTGAAAATTTATGCATCTAGGTGGCTACCAAATATTAGGAAGAATGGGCATGTCAAGAAGGAAATTGAATCTGATTCAGATTCAGATTCAGCAAGCGAAATAACTACGAAGCATCGTTTGCTTTTGGAGTCAATAGTGACCTTGCTTCCATCTGAGAAAGGTTCTGTTTCTTGCAGCTTCCTTCTTAAACTCTTGAAGGTAGCCAATATTCTTAATGCTTCTGCTTCTTCAAAGGTGGAACTCGCTAGAAGAGTAGGACTTCAGTTGGAGGAAGCCACAGTGAATGATCTTTTGATACCCTCAGTGTCAAACACCAAAGATATGTTATATGAAGTGGACTTGGTGATGACAATATTGGAGCAATTTACGTTGCAAGGTCAGAGTCCACCAACTAGCCCTCCGAGATCAAGGTTGGCCTTTGAAAGGAGGAGGTCTCGTTCAGCAGAGAATATTAACTTTGAATTCCAAGAAAGTAGGAGATCTTCCTCAGCATCTCATAGCTCAAAACTGAAGGTGGCTAAGCTTGTGGATAGGTACCTTCAAGAGGTTGCCAAGGATGTGAATTTGCCTCTGTGCAAATTCATTGCTCTCGCTGAAAGTATTCCAGAATTTGCAAGACATGATCATGATGATCTCTACAGAGCTATTGACACTTATCTCAAGGCTCATCCAGAACTCAACAAGAGCGAAAGGAAAAGGCTATGTCGAATTCTAGATTGCAAAAAGCTCTCTGTAGAGGCGTGCATGCATGCAGCACAAAACGAGCTACTCCCTCTAAGAGTAGTTGTACAAGTTCTCTTCTTTGAGCAAGCACGAGCAGCAGCATCTGGTGGCAAAGTAACTGACATGCCAAGCAACTTCAAGGCATTGCTCACTGCTCATGGCATTGACCCATCAAAACACACAGCACCATTGAGCACCACAACAAGTATACATGCTGATGACAATTGGAGTGTTTCTGGTTTCAAGTCACCAAAAATGAAGCTAGCTGAAGATGACTTGGATGAAAGTGATGTGCCTCGTGATGAAATTGGTAGAACTTCTAGATTTAAGGGTCTTCGTGCTCTTCCTACTCAGCCCAAACGAATGCTGAGTAGATTGTGGTCTAACAACAGAAGTGCCAATGAAAAAAATTAA 1869 0.4227 MKFMKLGSRPDTFYTAECVRTVASEVSSDLIIQVKATRYLLHKFPLLSKCLRLQRLCSQSPDSPQHQIVQLPDFPGGVEAFELCAKFCYGITITLSAYNIVAVRCAAEYLQMSEDVEKGNLIYKLEVFFNSCILHGWKDSIVTLQTTKALPLWSEDLAIASRCIETIASKVLSHPSKVSLSHSHSRRIRDDVSSCNGTESLRHKSTSKGWWAEDLAELSIDLYWRTMIAIKSGGKTPSNLIGDALKIYASRWLPNIRKNGHVKKEIESDSDSDSASEITTKHRLLLESIVTLLPSEKGSVSCSFLLKLLKVANILNASASSKVELARRVGLQLEEATVNDLLIPSVSNTKDMLYEVDLVMTILEQFTLQGQSPPTSPPRSRLAFERRRSRSAENINFEFQESRRSSSASHSSKLKVAKLVDRYLQEVAKDVNLPLCKFIALAESIPEFARHDHDDLYRAIDTYLKAHPELNKSERKRLCRILDCKKLSVEACMHAAQNELLPLRVVVQVLFFEQARAAASGGKVTDMPSNFKALLTAHGIDPSKHTAPLSTTTSIHADDNWSVSGFKSPKMKLAEDDLDESDVPRDEIGRTSRFKGLRALPTQPKRMLSRLWSNNRSANEKN* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0742 622 ProSiteProfiles NPH3 domain profile. 209 516 IPR027356 -
Apr3g0742 622 SUPERFAMILY POZ domain 20 114 IPR011333 -
Apr3g0742 622 Pfam NPH3 family 210 492 IPR027356 -
Apr3g0742 622 MobiDBLite consensus disorder prediction 575 593 - -
Apr3g0742 622 PANTHER OS12G0117600 PROTEIN 1 619 IPR043454 -
Apr3g0742 622 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 619 - -
Apr3g0742 622 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Apr3g0742 622 MobiDBLite consensus disorder prediction 575 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0742 Apr-Chr3 19545923 19549265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0742 26 522 EF-hand Containing Proteins AT3G44820 35.260 1.14e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0742 - - gmx:100792829 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0742 3 19545923 19549265 Apr3g0742 3 19545923 19549265 ECH